Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	4212368	4212409	42	2 [0]	[0] 4	espL4	type III secretion system effector EspL4

AATCATTTAAATATCTCATTGTTTATTGATGTCTTGAATTTTAACTATCAGAACAGTGAAAAAATTTAATATGATTACAACTAAAGAAA  >  NZ_CP009273/4212410‑4212498 |                                                                                         aaTCATTTAAATATCTCATTGTTTATTGATGTCTTGAATTTTAACTATCAGAACAGTGAAAAAATTTAATATGATTACAACTAAAGaaa  <  1:362021/89‑1 (MQ=255) aaTCATTTAAATATCTCATTGTTTATTGATGTCTTGAATTTTAACTATCAGAACAGTGAAAAAATTTAATATGATTACAACTAAAGaaa  >  1:498307/1‑89 (MQ=255) aaTCATTTAAATATCTCATTGTTTATTGATGTCTTGAATTTTAACTATCAGAACAGTGAAAAAATTTAATATGATTACAACTAAAGaaa  >  2:362021/1‑89 (MQ=255) aaTCATTTAAATATCTCATTGTTTATTGATGTCTTGAATTTTAACTATCAGAACAGTGAAAAAATTTAATATGATTACAACTAAAGaaa  <  2:498307/89‑1 (MQ=255) |                                                                                         AATCATTTAAATATCTCATTGTTTATTGATGTCTTGAATTTTAACTATCAGAACAGTGAAAAAATTTAATATGATTACAACTAAAGAAA  >  NZ_CP009273/4212410‑4212498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑