Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NZ_CP009273 4531500 4531510 11 2 [0] [0] 2 fimB/fimE type 1 fimbria switch DNA invertase FimB/type 1 fimbria switch DNA invertase FimE

ATTGATGTTATTGTAAGTGTGATTCTTAATTATCATAATAAACAT  >  NZ_CP009273/4531455‑4531499
                                            |
aTTGATGTTATTGTAAGTGTGATTCTTAATTATCATAATAAACAt  >  1:132367/1‑45 (MQ=255)
aTTGATGTTATTGTAAGTGTGATTCTTAATTATCATAATAAACAt  <  2:132367/45‑1 (MQ=255)
                                            |
ATTGATGTTATTGTAAGTGTGATTCTTAATTATCATAATAAACAT  >  NZ_CP009273/4531455‑4531499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: