Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	578771	578984	214	3 [1]	[0] 4	BW25113_RS26085/appY	tail fiber assembly protein/DNA‑binding transcriptional activator AppY

ATAAAGAAAAATTAAGCAAGCTGGATGTTGGTTTTTTGTTAATTGAATGGTTCTAATAATGTTTTTTTACTGTTGTTGAATGTGACTTGA  >  NZ_CP009273/578724‑578813                                               |                                            ataaAGAAAAATTAAGCAAGCTGGATGTTGGTTTTTTGTTAATTGAATGGTTCTAATAATGTTTTTTTACTGTTGTTGAATGTGACTTGa  >  1:343375/1‑90 (MQ=255)           aTTAAGCAAGCTGGATGTTGGTTTTTTGTTAATTGaa                                             <  1:224725/37‑1 (MQ=255)           aTTAAGCAAGCTGGATGTTGGTTTTTTGTTAATTGaa                                             >  2:224725/1‑37 (MQ=255)                                               |                                            ATAAAGAAAAATTAAGCAAGCTGGATGTTGGTTTTTTGTTAATTGAATGGTTCTAATAATGTTTTTTTACTGTTGTTGAATGTGACTTGA  >  NZ_CP009273/578724‑578813

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑