Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1066625	1066647	23	2 [1]	[0] 2	rutD	pyrimidine utilization protein D

TTTCTGGCTATCGGGCAGGGCGGCATGAAGTTCACTGGAACATGCTGTTGGCACCAGCAGATCATCACTGGCGCAGATGATTTGCACCGGGCAGCGGATGCGATCC  >  NZ_CP009273/1066535‑1066640                                                                                          |                 tttCTGGCTATCGGGCAGGGCGGCATGAAGTTCACTGGAACATGCTGTTGGCACCAGCAGATCATCACTGGCGCAGATGATTTGCACCgg                  <  1:329200/90‑1 (MQ=255)                 aGGGCGGCATGAAGTTCACTGGAACATGCTGTTGGCACCAGCAGATCATCACTGGCGCAGATGATTTGCACCGGGCAGCGGATGCGATcc  <  1:94689/90‑1 (MQ=255)                                                                                          |                 TTTCTGGCTATCGGGCAGGGCGGCATGAAGTTCACTGGAACATGCTGTTGGCACCAGCAGATCATCACTGGCGCAGATGATTTGCACCGGGCAGCGGATGCGATCC  >  NZ_CP009273/1066535‑1066640

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑