Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1229723	1229761	39	2 [1]	[1] 2	nhaB	Na(+)/H(+) antiporter NhaB

CGTCTTGCAGGTCGGTGTCTTCGGTACGGGAAGAGGCTACGCGGTGATAAATACCATAAAAACCGACTGCAACGCTGATCACCACCGCCACGACGGTTAAGGCATCGAGGAACGCGGA  >  NZ_CP009273/1229633‑1229750                                                                                          |                             cGTCTTGCAGGTCGGTGTCTTCGGTACGGGAAGAGGCTACGCGGTGATAAATACCATAAAAACCGACTGCAACGCTGATCACCACCGCCa                              >  2:275345/1‑90 (MQ=255)                             ggAAGAGGCTACGCGGTGATAAATACCATAAAAACCGACTGCAACGCTGATCACCACCGCCACGACGGTTAAGGCATCGAGGAACGCGga  >  1:275878/1‑90 (MQ=255)                                                                                          |                             CGTCTTGCAGGTCGGTGTCTTCGGTACGGGAAGAGGCTACGCGGTGATAAATACCATAAAAACCGACTGCAACGCTGATCACCACCGCCACGACGGTTAAGGCATCGAGGAACGCGGA  >  NZ_CP009273/1229633‑1229750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑