Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1229723	1229761	39	2 [1]	[1] 2	nhaB	Na(+)/H(+) antiporter NhaB

GCCGCCACGCAAAAAGAGAGCGACAGCAGCATTTTGGAGCGAATGCTTAACAGCAAACGGGTAAATATGAACAGCAACAGCTGTTTCATAA  >  NZ_CP009273/1229761‑1229851  |                                                                                          gccgccACGCAAAAAGAGAGCGACAGCAGCATTTTGGAGCGAATGCTTAACAGCAAACGGGTAAATATGAACAGCAACAGCTGTTTCATa   >  1:253403/1‑90 (MQ=255)  ccgccACGCAAAAAGAGAGCGACAGCAGCATTTTGGAGCGAATGCTTAACAGCAAACGGGTAAATATGAACAGCAACAGCTGTTTCATaa  <  2:275878/90‑1 (MQ=255)  |                                                                                          GCCGCCACGCAAAAAGAGAGCGACAGCAGCATTTTGGAGCGAATGCTTAACAGCAAACGGGTAAATATGAACAGCAACAGCTGTTTCATAA  >  NZ_CP009273/1229761‑1229851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑