Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1781399	1781416	18	2 [1]	[1] 4	ppsA/ppsR	phosphoenolpyruvate synthase/posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR

CATCATTCATGCCGAGTTGGTTATACCAAAGCACCAGCGGTGACGAGCCATTGTTGGACATCGAACAATCCTTTTGTGATAAATGAACGGTTTGA  >  NZ_CP009273/1781309‑1781403                                                                                          |      catcatTCATGCCGAGTTGGTTATACCAAAGCACCAGCGGTGACGAGCCATTGTTGGACATCGAACAATCCTTTTGTGATAAATGAACgg       >  1:165137/1‑90 (MQ=255)      ttcatGCCGAGTTGGTTATACCAAAGCACCAGCGGTGACGAGCCATTGCTGGACATCGAACAATCCTTTTGTGATAAATGAACGGTTTga  >  2:11124/1‑90 (MQ=255)                                                                                          |      CATCATTCATGCCGAGTTGGTTATACCAAAGCACCAGCGGTGACGAGCCATTGTTGGACATCGAACAATCCTTTTGTGATAAATGAACGGTTTGA  >  NZ_CP009273/1781309‑1781403

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑