mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,498,447 | 0 | C | T | 57.1% | 0.8 / 12.2 | 14 | S311S (TCG→TCA) | yhfS | aminotransferase class I/II‑fold pyridoxal phosphate‑dependent enzyme |
| * | NZ_CP009273 | 4,520,988 | 0 | T | G | 57.1% | 5.1 / 10.3 | 14 | T161P (ACT→CCT) | sgcX | M42 family metallopeptidase |
| * | NZ_CP009273 | 4,101,671 | 0 | G | T | 56.2% | ‑2.6 / 14.1 | 16 | R158S (CGT→AGT) | yiiQ | YiiQ family protein |
| * | NZ_CP009273 | 4,101,675 | 0 | G | T | 56.2% | ‑2.5 / 15.0 | 16 | N156K (AAC→AAA) | yiiQ | YiiQ family protein |
| * | NZ_CP009273 | 3,300,628 | 0 | T | G | 53.8% | 9.8 / 13.9 | 13 | T198P (ACC→CCC) | deaD | ATP‑dependent RNA helicase DeaD |
| * | NZ_CP009273 | 3,498,440 | 0 | C | T | 53.8% | ‑3.2 / 10.3 | 13 | E314K (GAA→AAA) | yhfS | aminotransferase class I/II‑fold pyridoxal phosphate‑dependent enzyme |
| * | NZ_CP009273 | 3,659,062 | 0 | C | A | 53.8% | 3.4 / 15.5 | 13 | A37S (GCG→TCG) | gadX | acid resistance transcriptional activator GadX |