Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	4241447	4241495	49	2 [0]	[1] 4	BW25113_RS20970	SopA family protein

GCCAGATAATGCAATGATATTGAAATCCGTTCTGGCCGTAAAACTGGTGATGCAATTAAAAATACTTAATATTGTTAATAAAAACTTTATTGAGAATA  >  NZ_CP009273/4241488‑4241585         |                                                                                          gCCAGATAATGCAATGATATTGAAATCCGTTCTGGCCGTAAAACTGGTGATGCAATTAAAAATACTTAATATTGTTAATAAAAACTTTAt          >  2:237894/1‑90 (MQ=255)         aTGCAATGATATTGAAATCCGTTCTGGCCGTAAAACTGGTGATGCAATTAAAAATAc                                   <  1:4546/57‑1 (MQ=255)         aTGCAATGATATTGAAATCCGTTCTGGCCGTAAAACTGGTGATGCAATTAAAAATAc                                   >  2:4546/1‑57 (MQ=255)         aTGCAATGATATTGAAATCCGTTCTGGCCGTAAAACTGGTGATGCAATTAAAAATACTTAATATTGTTAATAAAAACTTTATTGAGAata  >  2:38323/1‑90 (MQ=255)         |                                                                                          GCCAGATAATGCAATGATATTGAAATCCGTTCTGGCCGTAAAACTGGTGATGCAATTAAAAATACTTAATATTGTTAATAAAAACTTTATTGAGAATA  >  NZ_CP009273/4241488‑4241585

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑