Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2684907	2684909	3	2 [0]	[1] 2	qseE/purL	two component system sensor histidine kinase QseE/GlrK/phosphoribosylformylglycinamidine synthase

CAATGAGTTAAGTGTCGCCAGAAAGCGACACGGCAAACCA  >  NZ_CP009273/2684867‑2684906                                        | cAATGAGTTAAGTGTCGCCAGAAAGCGACACGGCAAacca  >  1:208129/1‑40 (MQ=255) cAATGAGTTAAGTGTCGCCAGAAAGCGACACGGCAAacca  <  2:208129/40‑1 (MQ=255)                                        | CAATGAGTTAAGTGTCGCCAGAAAGCGACACGGCAAACCA  >  NZ_CP009273/2684867‑2684906

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑