Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1362560	1362581	22	3 [1]	[1] 2	pspA	phage shock protein PspA

ACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGCGTCGGCGCGTGAGGTTGAATGGCAGGAAAAAGCC  >  NZ_CP009273/1362471‑1362560                                                                                         |  aCTTCGGCGCGCGCGTTGGCAGAAAAGAAACGGCTGACTCGCCGTATTGAACAAGCGTCGGCGCGTGAGGTTGAATGGCAGGAAAAAGcc  >  2:161724/1‑90 (MQ=255)    tCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGCGTCGGCGCGTGAGGTTGAATGGCAGGAAAAAGc   >  1:330772/1‑86 (MQ=255)    tCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGCGTCGGCGCGTGAGGTTGAATGGCAGGAAAAAGc   <  2:330772/86‑1 (MQ=255)                                                                                         |  ACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGCGTCGGCGCGTGAGGTTGAATGGCAGGAAAAAGCC  >  NZ_CP009273/1362471‑1362560

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑