Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1994186	1994188	3	2 [0]	[0] 3	fliZ	flagella biosynthesis regulatory protein FliZ

GTACCTGGGCTCATTTCAGTTTGCTCAAAAAGAAATTGCTTAAAGCCGATAATATCGAAAAAATCACTCTGCGTTTTGCAATGTAAATCA  >  NZ_CP009273/1994189‑1994278 |                                                                                          gTACCTGGGCTCATTTCAGTTTGCTCAAAAAGAAATTGCTTAAAg                                               >  1:114180/1‑45 (MQ=255) gTACCTGGGCTCATTTCAGTTTGCTCAAAAAGAAATTGCTTAAAg                                               <  2:114180/45‑1 (MQ=255) gTACCTGGGCTCATTTCAGTTTGCTCAAAAAGAAATTGCTTAAAGCCGATAATATCGAAAAAATCACTCTGCGTTTTGCAATGTAAATCa  >  1:277350/1‑90 (MQ=255) |                                                                                          GTACCTGGGCTCATTTCAGTTTGCTCAAAAAGAAATTGCTTAAAGCCGATAATATCGAAAAAATCACTCTGCGTTTTGCAATGTAAATCA  >  NZ_CP009273/1994189‑1994278

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑