Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1781500	1781510	11	2 [0]	[0] 2	ppsA/ppsR	phosphoenolpyruvate synthase/posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR

CATTTCTGCGCATTTATCTTTGCATATTTAACCGGATGAAAAAAACGGTGAATCGTTCAAGCAAATATATTTTTTTACTTTTTAAGACTG  >  NZ_CP009273/1781410‑1781499                                                                                          | caTTTCTGCGCATTTATCTTTGCATATTTAACCGGATGAAAAAAACGGTGAATCGTTCAAGCAAATATATTTTTTTACTTTTTAAGACTg  <  1:116054/90‑1 (MQ=255) caTTTCTGCGCATTTATCTTTGCATATTTAACCGGATGAAAAAAACGGTGAATCGTTCAAGCAAATATATTTTTTTACTTTTTAAGACTg  <  2:335377/90‑1 (MQ=255)                                                                                          | CATTTCTGCGCATTTATCTTTGCATATTTAACCGGATGAAAAAAACGGTGAATCGTTCAAGCAAATATATTTTTTTACTTTTTAAGACTG  >  NZ_CP009273/1781410‑1781499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑