Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1229277	1229311	35	2 [1]	[1] 3	nhaB	Na(+)/H(+) antiporter NhaB

AATAATGACTGACAAACCAATCAAGCCAACTTCCGCCAGATGCAACGCCAGCGCAGTCACCAGCCAGACGCCAATAATCGCCTGGACAATCAGAC  >  NZ_CP009273/1229187‑1229281                                                                                          |      aataatGACTGACAAACCAATCAAGCCAACTTCCGCCAGATGCAACGCCAGCGCAGTCACCAGCCAGACGCCAATAATCGCCTGGACAAt       <  1:360598/90‑1 (MQ=255)      tgactgacAAACCAATCAAGCCAACTTCCGCCAGATGCAACGCCAGCGCAGTCACCAGCCAGACGCCAATAATCGCCTGGACAATCAGAc  <  2:295842/90‑1 (MQ=255)                                                                                          |      AATAATGACTGACAAACCAATCAAGCCAACTTCCGCCAGATGCAACGCCAGCGCAGTCACCAGCCAGACGCCAATAATCGCCTGGACAATCAGAC  >  NZ_CP009273/1229187‑1229281

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑