Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1229277	1229311	35	2 [1]	[1] 3	nhaB	Na(+)/H(+) antiporter NhaB

TATCCTGACGGGTACGCTGGTGGCGGCTTTGATCGTCAAACTGTTGCAACACTTCGCGGACTTTCTCCGGCAGCGTTTCACCGTAGCCAA  >  NZ_CP009273/1229288‑1229377                         |                                                                  tATCCTGACGGGTACGCTGGTGGCGGCTTTGATCGTCAAACTGTTGCAACACTTCGCGGACTTTCTCCGGCAGCGTTTCACCGTAGCCaa  <  1:236928/90‑1 (MQ=255)                         ggcTTTGATCGTCAAACTGTTGCAACACTTCGCGGACtt                             >  1:323930/1‑39 (MQ=255)                         ggcTTTGATCGTCAAACTGTTGCAACACTTCGCGGACtt                             <  2:323930/39‑1 (MQ=255)                         |                                                                  TATCCTGACGGGTACGCTGGTGGCGGCTTTGATCGTCAAACTGTTGCAACACTTCGCGGACTTTCTCCGGCAGCGTTTCACCGTAGCCAA  >  NZ_CP009273/1229288‑1229377

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑