Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1965331	1965341	11	2 [1]	[1] 2	tar	methyl‑accepting chemotaxis protein II

TCAACGCTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGT  >  NZ_CP009273/1965241‑1965332                                                                                          |   tCAACGCTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTc    >  1:53367/1‑90 (MQ=255)   aaCGCTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGt  >  2:222124/1‑90 (MQ=255)                                                                                          |   TCAACGCTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGT  >  NZ_CP009273/1965241‑1965332

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑