Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1965331	1965341	11	2 [1]	[1] 2	tar	methyl‑accepting chemotaxis protein II

AGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGGGCTGGCTGCCAGACGGAACGCGGAAACTGCTTGCGTT  >  NZ_CP009273/1965338‑1965431     |                                                                                          aGCCGGTGGTTGCTCACTGGCAGGACGGGATGGGGTTTGCGGGTTATTGGGGAGGGGGCTGGCGGCCAGACGGAACGCGGAAACTGCTTg      >  2:243540/1‑90 (MQ=255)     ggtggtTGCTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGGGCTGGCTGCCAGACGGAACGCGGAAACTGCTTGCGtt  >  2:12222/1‑90 (MQ=255)     |                                                                                          AGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGGGCTGGCTGCCAGACGGAACGCGGAAACTGCTTGCGTT  >  NZ_CP009273/1965338‑1965431

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑