Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3448995	3449025	31	2 [1]	[1] 5	gspC	type II secretion system protein GspC

CCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAG  >  NZ_CP009273/3448905‑3449016                                                                                          |                       cccacccaATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCa                        <  1:156059/90‑1 (MQ=255)                       aaCATACATCGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAg  >  2:94408/1‑90 (MQ=255)                                                                                          |                       CCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAG  >  NZ_CP009273/3448905‑3449016

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑