Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3798164	3798203	40	2 [0]	[1] 3	rfaS	LPS core biosynthesis protein RfaS

ATGCTCAAAATCATATATAATATCGAAATAATTCGCGTTATCAAGAATAA  >  NZ_CP009273/3798114‑3798163                                                  | aTGCTCAAAATCATATATAATATCGAAATAATTCGCGTTATCAAGAATaa  <  1:18684/50‑1 (MQ=255) aTGCTCAAAATCATATATAATATCGAAATAATTCGCGTTATCAAGAATaa  >  2:18684/1‑50 (MQ=255)                                                  | ATGCTCAAAATCATATATAATATCGAAATAATTCGCGTTATCAAGAATAA  >  NZ_CP009273/3798114‑3798163

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑