Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2666580	2666643	64	3 [1]	[1] 2	[hcaD]	[hcaD]

AGGATAATTAGCGAATATCTCAATGCCTGGGGCGTGGCGAGGTGCAAGAGTGTGTATTACGTTTAAATCACATTATCTTGCAAAGGGATTGGTTATGAACACACTACGTTATTTTGATTTTGG  >  NZ_CP009273/2666611‑2666733                                  |                                                                                          aGGATAATTAGCGAATATCTCAATGCCTGGGGCGTGGCGAGGTGCAAGAGTGTGTATTACGTTTAAATCACATTATCTTGCAAAGGGAtt                                   <  2:150636/90‑1 (MQ=255)                                  gTGGCGAGGTGCAAGAGTGTGTATTACGTTTAAATCACATTATCTTGCAAAGGGATTGGTTATGAACACACTACGTTATTTTGATTTTgg  >  2:59423/1‑90 (MQ=255)                                  |                                                                                          AGGATAATTAGCGAATATCTCAATGCCTGGGGCGTGGCGAGGTGCAAGAGTGTGTATTACGTTTAAATCACATTATCTTGCAAAGGGATTGGTTATGAACACACTACGTTATTTTGATTTTGG  >  NZ_CP009273/2666611‑2666733

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑