| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NZ_CP009273 | 2,399,465 | Δ7 bp | coding (650‑656/939 nt) | lrhA ← | transcriptional regulator LrhA |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NZ_CP009273 | 2399465 | 2399471 | 7 | 150 [0] | [0] 151 | lrhA | transcriptional regulator LrhA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 2399464 | 0 (0.000) | 150 (1.270) | 59/170 | 0.2 | 100% | coding (657/939 nt) | lrhA | transcriptional regulator LrhA |
| ? | NZ_CP009273 | 2399472 = | 0 (0.000) | coding (649/939 nt) | lrhA | transcriptional regulator LrhA | |||||
Only 100 of 150 total aligned reads displayed.
CACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP009273/2399376‑2399464‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAAGAG > NZ_CP009273/2399472‑2399558 CACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGGCGAGA > 2:3048159/1‑90 CGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAG > 2:651771/1‑90 CGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAG > 1:395228/1‑90 CGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAG > 2:2992259/1‑90 GCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGC > 1:2955307/1‑90 AGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCA > 1:51234/1‑90 AGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCA > 2:3258850/1‑90 GTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGT > 1:831758/1‑90 GTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGT > 1:2467123/1‑90 GTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGT < 2:2360027/90‑1 GTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGT < 2:2678736/90‑1 GTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGT > 2:436874/1‑90 GTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGT > 1:1234505/1‑90 cCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGCCCGGCTTTCCCTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTC < 2:1651724/89‑1 TCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTC < 2:3099544/90‑1 TCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTC > 2:341239/1‑90 CGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑C < 2:2163684/90‑1 GGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCA < 1:651771/90‑1 GCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCAT < 1:1270412/90‑1 CTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATG < 1:1818566/90‑1 TCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGG < 2:132952/90‑1 CATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGA > 2:838670/1‑90 CATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGA > 1:2533911/1‑90 CATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGA > 2:1460086/1‑90 CATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CC > 2:3135257/1‑85 CATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CC < 1:3135257/85‑1 TCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAAT > 1:552613/1‑90 TCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAAT > 2:91661/1‑90 tccaAACCGGCGTTGCTGTCACGCCCAGACCGGCTTTGACTTCCGCCCGATCGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATC < 2:2703733/86‑1 TCTCAACCGGCCTTGCCGTCCCGCCAAGACCGGCTTTCCCTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATC < 2:1953146/90‑1 TCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATC < 1:2014016/90‑1 TCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATC < 2:887463/90‑1 TCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATC < 2:1596673/90‑1 TCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATC < 2:1045832/90‑1 TCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTG < 1:1239858/90‑1 ACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTT < 2:776392/90‑1 CGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTA > 2:2758648/1‑90 GGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTAT > 2:1821487/1‑90 GGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CC > 1:2481432/1‑72 GGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CC > 1:1392491/1‑72 GGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CC < 2:1392491/72‑1 GGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CC < 2:2481432/72‑1 CCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTA > 2:705471/1‑90 GCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCG < 1:2170392/90‑1 GCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCG < 1:2349854/90‑1 GTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCG < 1:448961/90‑1 GTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCG < 2:551005/90‑1 GTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCG < 2:2101341/90‑1 CACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGac < 1:100508/90‑3 CACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCC < 2:112816/90‑1 CACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCC < 2:2306607/90‑1 CACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCC < 1:617531/90‑1 CACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCC > 2:339163/1‑90 CAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCT < 1:2912272/70‑1 GACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCAT > 1:1301837/1‑90 CGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATC > 1:3156918/1‑90 GGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCG > 2:2847453/1‑90 GGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCG > 1:2688608/1‑90 GGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCG > 2:692887/1‑90 GCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGC < 2:835064/90‑1 GCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGC < 2:2500871/90‑1 TCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAA < 1:1463603/90‑1 TCACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAA > 2:2303345/1‑90 CACTGCTGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAC < 1:3371615/90‑1 CACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCCCCATATCGCGAAAC < 1:797650/90‑1 CACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAC < 2:3175647/90‑1 CACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAC < 1:536948/90‑1 CACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAC < 2:1854036/90‑1 CACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAC < 2:3095711/90‑1 CACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAC < 1:15494/90‑1 CACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAC < 1:341239/90‑1 CACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAC < 1:1821487/90‑1 CACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAC < 2:2970323/90‑1 CACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAC < 2:2946668/90‑1 CACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAC < 1:3326427/90‑1 CACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAC < 2:2809108/90‑1 CACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAC < 1:188117/90‑1 CACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAC < 1:2280334/90‑1 CACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAC < 1:2550989/90‑1 CACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAC < 1:948890/90‑1 CACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAC < 2:204309/90‑1 CACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAC < 2:1179370/90‑1 CACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCAT < 2:2249371/45‑1 ACTGCCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCGCCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAC < 2:2735246/90‑1 CCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTT < 1:1492147/53‑1 CCGCACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTT > 2:1492147/1‑53 CACGAACGGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGG < 2:2955307/90‑1 ACGGCCGGAAGCGCCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCAT < 2:2052875/90‑1 GGCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCC < 1:440296/90‑1 GCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCA < 1:1103343/90‑1 GCCGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATC < 1:2961269/37‑1 CGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGC < 2:458673/90‑1 CGGAAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGC < 1:1339606/90‑1 AAGCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAAT < 1:453879/90‑1 GCGTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATAC < 1:2847453/90‑1 GTCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAA < 1:2651526/90‑1 TCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAAG < 1:355005/90‑1 TCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAAG > 2:3404336/1‑90 TCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAAG > 2:2408267/1‑90 TCGAGAAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGACCATCCAGCAATACAAG > 1:603915/1‑90 CACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP009273/2399376‑2399464‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGCCAGTCG‑CCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAAGAG > NZ_CP009273/2399472‑2399558 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |