New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP009273 = 351244931 (0.260)160 (1.360) 51/170 0.3 83.8% intergenic (‑26/+375) aroK/hofQ shikimate kinase AroK/DNA uptake porin HofQ
?NZ_CP009273 3576788 = NA (NA)coding (391/417 nt) BW25113_RS17825 YrhA family protein

Only 100 of 160 total aligned reads displayed.

CAATAGTGCTTTTTCCGGCACCCATAGGCCCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NZ_CP009273/3512363‑3512449
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCT  >  NZ_CP009273/3576788‑3576873
                                                                                                                                                                             
CAATAGTGCTTTTTCCGGCACCCATAGGCCCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGT                                                                                     >  2:3009766/1‑90
CAATAGTGCTTTTTCCGGCACCCATAGGCCCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGT                                                                                     >  1:2596987/1‑90
     GTGCTTTTTCCGGCACCCATAGGCCCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGC                                                                                <  1:3231842/90‑1
      TGCTTTTTCCGGCACCCATAGGCCCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCT                                                                               <  1:38577/90‑1
      TGCTTTTTCCGGCACCCATAGGCCCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCT                                                                               <  1:3139823/90‑1
          TTTTCCGGCACCCATAGGCCCCACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCA                                                                           <  2:1994861/90‑1
          TTTTCCGGCACCCATAGGCCCAACCAGAAAGATCTTGCGTTTCTCTGCCATTTTTTCGGTTCTACTAAGACTATTCGGGTGATGCTGCCA                                                                           <  1:19494/90‑1
          TTTTCCGGCACCCATAGGCCCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCA                                                                           <  2:542214/90‑1
          TTTTCCGGCACCCATAGGCCCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCA                                                                           <  2:353020/90‑1
            TTCCGGCACCCATAGGCCCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAAC                                                                         >  1:856916/1‑90
            TTCCGGCACCCATAGGCCCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAAC                                                                         <  2:552345/90‑1
              CCGGCACCCATAGGCCCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTT                                                                       <  1:2056426/90‑1
                GGCACCCATAGGCCCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTAC                                                                     <  1:977296/90‑1
                    CCCATAGGCCCAACCAGAAAGATATTGCGTTTCTCTTCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGAT                                                                 <  1:3104926/90‑1
                    CCCATAGGCCCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGAT                                                                 >  2:237635/1‑90
                     CCATAGGCCCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATT                                                                <  1:2844190/90‑1
                     CCATAGGCCCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATT                                                                <  1:1583450/90‑1
                      CATAGGCCCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAATACTATTCGGGTGATGCTGCCAACTTACTGATTT                                                               <  2:396645/90‑1
                      CATAGGCCCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTc                                                               <  1:76490/90‑2
                      CATAGGCCCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTT                                                               <  1:563110/90‑1
                      CATAGGCCCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTT                                                               <  1:343026/90‑1
                      CATAGGACCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTT                                                               <  1:3309133/90‑1
                        TAGGCCCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCTGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAG                                                             <  1:2134796/90‑1
                        TAGGCCCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAG                                                             <  1:475363/90‑1
                        TAGGCCCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAG                                                             <  1:869022/90‑1
                        TAGGCCCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAG                                                             <  1:2994722/90‑1
                              CAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATG                                                       >  2:2156620/1‑90
                              CAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATG                                                       >  2:2263717/1‑90
                              CAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCA                                                                           >  2:2961205/1‑70
                                ACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGAT                                                     <  2:2823645/90‑1
                                ACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGAT                                                     >  1:225289/1‑90
                                   AGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGT                                                  <  1:1510657/90‑1
                                   AGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGT                                                  <  2:2307604/90‑1
                                         ATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTT                                            <  1:3015734/90‑1
                                           ATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGA                                          >  2:2594936/1‑90
                                             TGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGC                                                                             >  2:7074/1‑53
                                             TGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGC                                                                             <  1:7074/53‑1
                                              GCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGT                                       >  2:2019424/1‑90
                                              GCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGT                                       <  2:303953/90‑1
                                              GCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGT                                       <  1:2985484/90‑1
                                              GCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTT                                                                       <  1:2972059/58‑1
                                                GTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGC                                     >  1:434483/1‑90
                                                  TTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTC                                   >  2:587258/1‑90
                                                  TTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTAC                                                                     <  1:339885/56‑1
                                                  TTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTAC                                                                     <  1:2338749/56‑1
                                                   TCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCC                                  >  2:2776889/1‑90
                                                   TCTCTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCC                                  >  2:722675/1‑90
                                                      CTGCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGT                               <  2:1464816/90‑1
                                                        GCCATTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG                             >  1:617757/1‑90
                                                            TTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTC                         <  2:856916/90‑1
                                                            TTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTC                         <  2:2057052/90‑1
                                                            TTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTC                         <  1:813464/90‑1
                                                            TTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTC                         <  2:3113797/90‑1
                                                            TTTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTC                         <  2:245330/90‑1
                                                             TTTTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCT                        >  1:401949/1‑90
                                                               TTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGT                      <  2:2194257/90‑1
                                                               TTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGT                      <  1:2351394/90‑1
                                                               TTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGT                      <  1:1842815/90‑1
                                                               TTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGT                      <  1:2776889/90‑1
                                                               TTTCGGTACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGT                      <  1:722675/90‑1
                                                                      ACTACTAAGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATC               <  1:2308631/90‑1
                                                                        TACTAAGCCTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAG             <  2:323099/90‑1
                                                                             AGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTC        <  2:2073598/90‑1
                                                                             AGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTC        <  2:929599/90‑1
                                                                             AGACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTC        <  1:540967/90‑1
                                                                              GACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCC       >  1:1083055/1‑90
                                                                              GACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCC       >  1:845966/1‑90
                                                                              GACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCC       >  1:677765/1‑90
                                                                              GACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCC       >  2:2957811/1‑90
                                                                              GACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTC                         <  2:848461/72‑1
                                                                              GACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGT                                       <  2:3129555/58‑1
                                                                              GACTATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGT                                       >  1:3129555/1‑58
                                                                                 TATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTC    >  1:2095342/1‑90
                                                                                 TATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTC    >  2:1768792/1‑90
                                                                                 TATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTC    >  1:2748107/1‑90
                                                                                 TATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTC    >  2:1078110/1‑90
                                                                                 TATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTC    >  1:972077/1‑90
                                                                                 TATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTC    >  2:2587558/1‑90
                                                                                 TATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTC        >  1:2709877/1‑86
                                                                                  ATTCGGGTGATGCTGCCAACTTGCTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCC   >  2:1825394/1‑90
                                                                                  ATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCC   >  2:2932834/1‑90
                                                                                  ATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCC   >  1:3338402/1‑90
                                                                                  ATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCC   <  2:2534599/90‑1
                                                                                  ATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCC   >  2:1370314/1‑90
                                                                                  ATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCC   <  1:2957811/90‑1
                                                                                  ATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCC   >  2:1612261/1‑90
                                                                                  ATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCC   <  1:1052305/90‑1
                                                                                  ATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCC   >  2:413245/1‑90
                                                                                  ATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTG                              >  2:1897402/1‑63
                                                                                  ATTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTG                              <  1:1897402/63‑1
                                                                                   TTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCT  >  1:1269507/1‑90
                                                                                   TTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCT  >  1:1050112/1‑90
                                                                                   TTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCT  >  1:1765086/1‑90
                                                                                   TTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCT  >  1:1996274/1‑90
                                                                                   TTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCT  >  2:3275277/1‑90
                                                                                   TTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCT  >  2:3008342/1‑90
                                                                                   TTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCT  >  2:1320951/1‑90
                                                                                   TTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCT  >  2:2166340/1‑90
                                                                                   TTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCA                                 >  1:207789/1‑59
                                                                                   TTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCA                                 <  2:207789/59‑1
                                                                                                                                                                             
CAATAGTGCTTTTTCCGGCACCCATAGGCCCAACCAGAAAGATATTGCGTTTCTCTGCCATTTTTTCGGTACTACTAAGACTATTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NZ_CP009273/3512363‑3512449
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCT  >  NZ_CP009273/3576788‑3576873

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.