New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP009273 = 299793278 (2.350)9 (0.080) 8/156 4.1 3.3% coding (101/330 nt) ykgJ YkgJ family cysteine cluster protein
?NZ_CP009273 = 299801 274 (2.530)coding (93/330 nt) ykgJ YkgJ family cysteine cluster protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 281 total aligned reads displayed.

TCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGCACCACACGTCATGCATGGATTC  >  NZ_CP009273/299705‑299882
                                                                                        |                                                                                         
tCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCggg                                                                                          >  1:1918217/1‑90 (MQ=255)
      aaGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAgg                                                                                    >  2:1576927/1‑89 (MQ=255)
      aaGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGt                                                                                    >  1:1569037/1‑90 (MQ=255)
      aaGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGt                                                                                    >  2:2970072/1‑90 (MQ=255)
       aGGGCAATACATCGGGGGTTTTTCTGATTGGTCCCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTa                                                                                   <  2:2830990/90‑1 (MQ=255)
        gggCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTAc                                                                                  >  2:1499026/1‑90 (MQ=255)
        gggCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTAc                                                                                  >  1:934422/1‑90 (MQ=255)
           cAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGc                                                                               <  1:3138195/90‑1 (MQ=255)
             aTACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGGACCGCCa                                                                             >  2:165751/1‑90 (MQ=255)
              tACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAg                                                                            >  2:2380136/1‑90 (MQ=255)
                  tCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCAtt                                                                        >  2:2757688/1‑89 (MQ=255)
                  tCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCAtc                                                                        >  2:2547831/1‑90 (MQ=255)
                  tCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCAtc                                                                        >  1:2993456/1‑90 (MQ=255)
                  tCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCAtc                                                                        >  2:3067719/1‑90 (MQ=255)
                  tCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCAtc                                                                        >  2:3319720/1‑90 (MQ=255)
                   cGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCAtcg                                                                       >  1:1392428/1‑90 (MQ=255)
                    gggggTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCAtcgt                                                                      <  1:3212228/90‑1 (MQ=255)
                     ggggTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCAtcggc                                                                     >  1:1055847/1‑88 (MQ=255)
                        gTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGc                                                                  >  2:780776/1‑90 (MQ=255)
                          ttttCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCtt                                                                >  1:3252981/1‑90 (MQ=255)
                           tttCTGATTGGTCCCGCTCATGCATCGGTAAAAAGGGGATATTTGTTCAGTGAGCCTGGAGGGAATAGTACCGCCAGCATCGTCGGCTTc                                                               <  2:1672008/90‑1 (MQ=255)
                           tttCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTc                                                               >  2:2017043/1‑90 (MQ=255)
                              cTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGc                                                            >  2:2171481/1‑90 (MQ=255)
                               tGATTGGTCCCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCGGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGcc                                                           <  2:1751550/90‑1 (MQ=255)
                                tcttGGTCCCGCACATGCATGGGAAAAAGGGGGATATTGTTTAAGTGAGCCTGGCGGTAATATTACCGCCAGCATCGTCGGCTTCGGccc                                                          <  2:3381047/88‑1 (MQ=255)
                                gATTGGTCCCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGccc                                                          <  1:418771/90‑1 (MQ=255)
                                gATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGGATAGTACCGCCAGCATCGTCGGCTTCGGccc                                                          >  1:3347546/1‑90 (MQ=255)
                                gATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGccc                                                          <  1:375326/90‑1 (MQ=255)
                                 aTTGGTCCCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCa                                                         <  1:264503/90‑1 (MQ=255)
                                 aTTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGGGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCa                                                         <  2:3224104/90‑1 (MQ=255)
                                 aTTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCa                                                         <  2:1378378/90‑1 (MQ=255)
                                 aTTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCa                                                         >  1:1000757/1‑90 (MQ=255)
                                  ttGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTAACGCCAGCATCGTCGGCTTCGGCCCAg                                                        >  1:3381047/1‑90 (MQ=255)
                                   tGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGt                                                       >  2:1699462/1‑90 (MQ=255)
                                          gCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGaa                                                                                        >  2:224730/1‑50 (MQ=255)
                                          gCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGccc                                                          <  2:1398545/80‑1 (MQ=255)
                                          gCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAaga                                                >  2:1200672/1‑90 (MQ=255)
                                          gCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAaga                                                >  2:1280700/1‑90 (MQ=255)
                                          gCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAaga                                                >  2:2201806/1‑90 (MQ=255)
                                          gCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAaga                                                >  1:3358289/1‑90 (MQ=255)
                                          gCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAaga                                                >  1:1716244/1‑90 (MQ=255)
                                          gCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGGCGGCTTCGGCCCAGTAAAAaga                                                >  2:374227/1‑90 (MQ=255)
                                          gCTCATGCATCGGGGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAAAAAGACGGCCACCCGCGTGGGCGTCGGCCCGGGGAAAaga                                                >  2:2119711/1‑90 (MQ=255)
                                            tCATGCACCGGTGAAAAGGGGATTTTTTTTCAGTGAGCCTGGGGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAgaga                                              <  2:3075235/90‑1 (MQ=255)
                                              aTGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCt                                                                 <  1:605658/69‑1 (MQ=255)
                                              aTGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCt                                                                 >  2:605658/1‑69 (MQ=255)
                                              aTGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGAcg                                            >  1:2225855/1‑90 (MQ=255)
                                              aTGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGAcg                                            >  1:715093/1‑90 (MQ=255)
                                                   tCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATa                                                                                      <  1:1249365/43‑1 (MQ=255)
                                                   tCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATa                                                                                      >  2:1249365/1‑43 (MQ=255)
                                                   tCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTGGGCTTCGGCCCAGTAAAAAGAGACGCGGaa                                       >  1:3154113/1‑90 (MQ=255)
                                                    cGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGaaa                                      >  1:1482141/1‑90 (MQ=255)
                                                    cGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGaaa                                      >  1:2898998/1‑90 (MQ=255)
                                                    cGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGaaa                                      >  1:2058958/1‑90 (MQ=255)
                                                    cGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGaaa                                      >  1:2381132/1‑90 (MQ=255)
                                                     ggTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGGCCAGTAAAAAGAGAGGCGGaaaa                                     >  2:2581334/1‑90 (MQ=255)
                                                     ggTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGaaaa                                     >  2:3200332/1‑90 (MQ=255)
                                                     ggTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGaaaa                                     >  2:727819/1‑90 (MQ=255)
                                                     ggTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGaaaa                                     >  2:818666/1‑90 (MQ=255)
                                                         aaagGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGc                                 <  1:2119711/90‑1 (MQ=255)
                                                          aaaGGGGATATTTGTCCAGTGAGCCGGGGGGAAATAGTCCCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGca                                <  2:1951056/90‑1 (MQ=255)
                                                           aaGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGcac                               >  2:1526949/1‑90 (MQ=255)
                                                             ggggATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCAGCGGCGGCTTTGGCCCAGGAAAAAGAGACGCGGGAAAATGCacaa                             >  2:2274312/1‑90 (MQ=255)
                                                               ggATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCCGTAAAAAGAGACGCGGAAAAATGGacaaaa                           >  2:2882233/1‑88 (MQ=255)
                                                               ggATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCacaaca                           >  1:2811139/1‑90 (MQ=255)
                                                               ggATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCacaaca                           >  1:2459047/1‑90 (MQ=255)
                                                                gATATTTGTTCAGTGAGCCTGGGGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAg                          <  2:342573/90‑1 (MQ=255)
                                                                gATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAg                          >  1:2298015/1‑90 (MQ=255)
                                                                gATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAg                          >  1:2948790/1‑90 (MQ=255)
                                                                 atatTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAgg                         <  1:2530650/90‑1 (MQ=255)
                                                                  tttttGTTCAGTGGGCCTGGGGGGAATAGTCCCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGc                        <  2:2564990/88‑1 (MQ=255)
                                                                  tatTTTTTCAGTGAGCCTGGCGGAAATAGTCCCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGc                        <  2:2489509/90‑1 (MQ=255)
                                                                  tatTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGc                        <  1:2694771/90‑1 (MQ=255)
                                                                  tatTTGTTCAGTGAGCCTGGCGGGAATAGGACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGc                        >  2:3002887/1‑90 (MQ=255)
                                                                  tatTTGTTCAGTGAGCCGGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGc                        <  2:1455778/90‑1 (MQ=255)
                                                                   atTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGca                       <  1:1748078/90‑1 (MQ=255)
                                                                    tttGTTCAGTGAGCCTGGCGGGAATAGTCCCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGc                        <  2:699758/88‑1 (MQ=255)
                                                                    tttGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGcac                      >  1:2489509/1‑90 (MQ=255)
                                                                     ttGTTCGGGGCGCCTGGCGGAAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGcacc                     <  2:2712693/90‑1 (MQ=255)
                                                                       gTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGcaccac                   >  2:919742/1‑90 (MQ=255)
                                                                       gTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGcaccac                   <  1:1280700/90‑1 (MQ=255)
                                                                         tCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGCACCacac                 >  2:2742151/1‑90 (MQ=255)
                                                                         tCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGCACCacac                 >  1:1859968/1‑90 (MQ=255)
                                                                            gTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGCACcaca                  >  1:1658576/1‑86 (MQ=255)
                                                                            gTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGCACCACACGTc              >  1:1979665/1‑90 (MQ=255)
                                                                            gTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGCACCACACGTc              >  2:1079563/1‑90 (MQ=255)
                                                                            gTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGCACCACACGTc              >  2:2681153/1‑90 (MQ=255)
                                                                                gCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGcaccac                   <  1:813506/81‑1 (MQ=255)
                                                                                gCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGCACCACACGTcatgc          >  1:3038154/1‑90 (MQ=255)
                                                                                 ccTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGCACCACACGTcatgca         >  1:11002/1‑90 (MQ=255)
                                                                                  cTGGGGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGCACCACACGTcatgcat        <  2:523029/90‑1 (MQ=255)
                                                                                  cTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGCACCACACGTcatgcat        <  1:2213462/90‑1 (MQ=255)
                                                                                  cTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGCACCACACGTcatgcat        <  1:2751907/90‑1 (MQ=255)
                                                                                  cTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGCACCACACGTcatgcat        <  1:2742151/90‑1 (MQ=255)
                                                                                  cTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGCACCACACGTcatgcat        <  1:1200672/90‑1 (MQ=255)
                                                                                  cTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGCACCACACGTcatgcat        <  1:636591/90‑1 (MQ=255)
                                                                                  cTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGCACCACACGTcatgcat        <  2:894021/90‑1 (MQ=255)
                                                                                  cTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGCACCACACGTcatgcat        <  2:2445506/90‑1 (MQ=255)
                                                                                      cGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGCACCACACGTCATGCATGGAt    >  2:214956/1‑90 (MQ=255)
                                                                                      cGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGCACCACACGTCATGCATGGAt    >  2:1820103/1‑90 (MQ=255)
                                                                                        |                                                                                         
TCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCGGGAATAGTACCGCCAGCATCGTCGGCTTCGGCCCAGTAAAAAGAGACGCGGAAAAATGCACAACAGGCACCACACGTCATGCATGGATTC  >  NZ_CP009273/299705‑299882

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.