BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP009273	= 1903072	10 (0.080)	133 (1.130)	53/170	0.3	93.0%	intergenic (‑49/‑110)	mgrB/yobH	PhoP/PhoQ regulator MgrB/YobH family protein
*	?	NZ_CP009273	= 2096424	NA (NA)	133 (1.130)	53/170	0.3	93.0%	intergenic (‑68/+3)	BW25113_RS10605/wbbL	IS5‑like element IS5 family transposase/N‑acetylglucosaminyl‑diphospho‑decaprenol L‑rhamnosyltransferase WbbL

Only 100 of 116 total aligned reads displayed.

AGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCG  >  NZ_CP009273/2096343‑2096513

aGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATccc                                                                                   <  2:107946/90‑1 (MQ=33)

 gTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCt                                                                                  <  2:3094069/90‑1 (MQ=35)

 gTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCt                                                                                  <  1:3242826/90‑1 (MQ=35)

   tgatgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTaa                                                                                <  2:2600554/90‑1 (MQ=38)

   tgatgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTaa                                                                                <  2:1500116/90‑1 (MQ=38)

   tgatgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCAACTTCCTTAATCCCTaa                                                                                <  2:3158868/90‑1 (MQ=255)

    gatgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAAc                                                                               >  1:2154625/1‑90 (MQ=39)

     atgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACa                                                                              >  1:2951325/1‑90 (MQ=40)

      tgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACAt                                                                             >  1:3179434/1‑90 (MQ=255)

          tCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACa                                                                              <  1:1045801/85‑1 (MQ=40)

          tCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACa                                                                              >  2:1045801/1‑85 (MQ=40)

          tCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAAt                                                                         <  1:1068722/90‑1 (MQ=255)

          tCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAAt                                                                         <  2:992141/90‑1 (MQ=255)

           cATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATg                                                                        >  2:2888121/1‑90 (MQ=255)

             tgatgaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGac                                                                      <  1:1214840/90‑1 (MQ=255)

             tgatgaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGac                                                                      <  2:146179/90‑1 (MQ=255)

              gatgaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGaca                                                                     <  1:2762882/90‑1 (MQ=255)

              gatgaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGaca                                                                     <  1:2492313/90‑1 (MQ=255)

                   aCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTaa                                                                                <  2:1353904/74‑1 (MQ=39)

                   aCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTaa                                                                                >  1:1353904/1‑74 (MQ=39)

                     ccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATaaa                                                              <  2:2675017/90‑1 (MQ=255)

                     ccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATaaa                                                              <  2:230116/90‑1 (MQ=255)

                      cTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATaaaa                                                             >  1:2093766/1‑90 (MQ=255)

                      cTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATaaaa                                                             >  1:3236796/1‑90 (MQ=255)

                      cTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATaaaa                                                             >  1:341621/1‑90 (MQ=255)

                        gTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATc                                                           >  2:3202996/1‑90 (MQ=255)

                             aTGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGaaa                                                      >  1:2690452/1‑90 (MQ=255)

                             aTGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGaaa                                                      >  2:2202323/1‑90 (MQ=255)

                             aTGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGaaa                                                      >  2:1488821/1‑90 (MQ=255)

                             aTGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGaaa                                                      >  1:2044984/1‑90 (MQ=255)

                             aTGGCTCCAGATGACAAACATGATCTCATATCAGGGAC‑TGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAg                                                     >  2:1048515/1‑90 (MQ=255)

                              tgacTCAAGATGACAAACATCATCTCATATCAGGGACTTGTTCGCACCTTCCTTCATCCCTAACATAAATGCCACAATAAAATCAGAAAg                                                     <  2:239915/87‑1 (MQ=21)

                              tGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAg                                                     >  1:2125830/1‑90 (MQ=255)

                              tGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAg                                                     >  1:269500/1‑90 (MQ=255)

                                gCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGca                                                   >  2:531814/1‑90 (MQ=255)

                                  tCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGaa                                                       >  1:3077648/1‑84 (MQ=255)

                                  tCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGaa                                                       <  2:3077648/84‑1 (MQ=255)

                                  tCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGcaca                                                 >  1:2235696/1‑90 (MQ=255)

                                  tCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGcaca                                                 >  1:2738875/1‑90 (MQ=255)

                                  tCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGcaca                                                 >  1:2610432/1‑90 (MQ=255)

                                  tCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGcaca                                                 >  1:1464958/1‑90 (MQ=255)

                                   ccAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAg                                                >  2:1145126/1‑90 (MQ=255)

                                     aGATGACAAACATGATCTTATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGa                                              >  1:773811/1‑90 (MQ=255)

                                     aGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGa                                              >  1:1410108/1‑90 (MQ=255)

                                          aCAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAAttt                                         >  2:390088/1‑90 (MQ=255)

                                           cAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAAtttt                                        >  1:3275075/1‑90 (MQ=255)

                                             aaCATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCt                                      >  2:760038/1‑90 (MQ=255)

                                             aaCATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCt                                      >  2:1059231/1‑90 (MQ=255)

                                                aTGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTAc                                   <  2:3407292/90‑1 (MQ=255)

                                                aTGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTAc                                   <  1:208914/90‑1 (MQ=255)

                                                aTGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTAc                                   <  1:2437384/90‑1 (MQ=255)

                                                aTGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTAc                                   <  1:2368463/90‑1 (MQ=255)

                                                aTGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTAc                                   <  2:1481109/90‑1 (MQ=255)

                                                aTGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTAc                                   <  1:1663472/90‑1 (MQ=255)

                                                  gctctaATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACgg                                 <  1:1099345/88‑1 (MQ=255)

                                                  gATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACgg                                 <  2:1410108/90‑1 (MQ=255)

                                                  gATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACgg                                 <  2:2988689/90‑1 (MQ=255)

                                                    tctcATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGaa                               >  2:2810548/1‑90 (MQ=255)

                                                     ctcATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGaat                              <  1:390088/90‑1 (MQ=255)

                                                       cATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGaataa                            >  2:2904874/1‑90 (MQ=255)

                                                       cATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGaataa                            >  2:35325/1‑90 (MQ=255)

                                                       cATATCAGAGACTTGTTCGCTTCTCCCTTAATCCCTAACATCAATTCCATAATAAAACAAGAAAGCACCAGAAATTTTCTTACGGaataa                            <  2:2451308/90‑1 (MQ=255)

                                                        atatCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGaataat                           <  1:613458/90‑1 (MQ=255)

                                                        atatCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGaataat                           >  2:2360441/1‑90 (MQ=255)

                                                        atatCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGaataat                           <  2:2637139/90‑1 (MQ=255)

                                                         tatCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACa                                                                              <  2:3404350/38‑1 (MQ=255)

                                                         tatCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACa                                                                              >  1:3404350/1‑38 (MQ=255)

                                                         tatCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATc                          >  2:3377884/1‑90 (MQ=255)

                                                             aGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGt                      >  1:1499786/1‑90 (MQ=255)

                                                             aGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGt                      >  2:1539656/1‑90 (MQ=255)

                                                             aGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGt                      >  2:3072874/1‑90 (MQ=255)

                                                              gggACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATc                          <  1:1542924/85‑1 (MQ=255)

                                                              gggACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATc                          >  2:1542924/1‑85 (MQ=255)

                                                              gggACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTa                     >  1:2720200/1‑90 (MQ=255)

                                                              gggACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTa                     <  1:2588174/90‑1 (MQ=255)

                                                              gggACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTa                     >  2:43591/1‑90 (MQ=255)

                                                              gggACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTa                     >  2:1799564/1‑90 (MQ=255)

                                                              gggACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTa                     >  2:1246315/1‑90 (MQ=255)

                                                              gggACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTa                     >  2:1289596/1‑90 (MQ=255)

                                                               ggACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTaa                    <  2:1548992/90‑1 (MQ=255)

                                                                 aCTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCtt                                     >  2:1949517/1‑71 (MQ=255)

                                                                 aCTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAg                  >  2:1718154/1‑90 (MQ=255)

                                                                 aCTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAg                  >  1:1871008/1‑90 (MQ=255)

                                                                 aCTTGTTCGCACCTTCCTCAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAg                  >  2:627479/1‑90 (MQ=255)

                                                                  cTTGTTCGCACCTTCCTTAATCCCTAACATAAATGacac                                                                    <  2:1358502/39‑1 (MQ=255)

                                                                  cTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGa                 >  2:1989694/1‑90 (MQ=255)

                                                                   ttGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGAt                >  1:3061828/1‑90 (MQ=255)

                                                                   ttGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGAt                >  1:1310680/1‑90 (MQ=255)

                                                                   ttGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGAt                >  2:1149952/1‑90 (MQ=255)

                                                                    tGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGAtt               >  1:1141336/1‑90 (MQ=255)

                                                                    tGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGAtt               >  2:2152389/1‑90 (MQ=255)

                                                                       tCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCg            >  2:2082505/1‑90 (MQ=255)

                                                                       tCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCg            >  2:1894738/1‑90 (MQ=255)

                                                                           aCCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTc        <  1:2448704/90‑1 (MQ=255)

                                                                           aCCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTc        <  2:958274/90‑1 (MQ=255)

                                                                           aCCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTc        <  1:2088375/90‑1 (MQ=255)

                                                                               tccttAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCAtct    >  1:3226853/1‑90 (MQ=255)

                                                                               tccttAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCAtct    >  2:492567/1‑90 (MQ=255)

                                                                                ccttAATCCCTAACATAAATGACACAATTAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCAtctc   <  2:2610432/90‑1 (MQ=255)

                                                                                 cttAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCg  <  2:1289197/90‑1 (MQ=255)

AGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCG  >  NZ_CP009273/2096343‑2096513

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.