Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3454158	3454168	11	2 [1]	[0] 3	gspF	type II secretion system inner membrane protein GspF

GTGGCCTCTGGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCC  >  NZ_CP009273/3454169‑3454258 |                                                                                          gtggCCTCTGGCGAAAAAAGCGGGCAGCTCGGCACTTTAATGGTCAGAGCCGCAGGTAACCAGAAGGCAATCCAACAAAATCGGATCGcc  >  2:266904/1‑90 (MQ=255) gtggCCTCTGGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGcc  >  1:160605/1‑90 (MQ=255) gtggCCTCTGGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGcc  >  1:323783/1‑90 (MQ=255) |                                                                                          GTGGCCTCTGGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCC  >  NZ_CP009273/3454169‑3454258

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑