New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP009273 2282398 =NA (NA)148 (1.890) 56/160 0.1 100% pseudogene (3/2532 nt) yejO autotransporter YejO
?NZ_CP009273 = 3629062 0 (0.000)coding (862/1053 nt) yhiM DUF2776 domain‑containing protein

Only 100 of 148 total aligned reads displayed.

ATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NZ_CP009273/2282485‑2282398
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGATCATTCCGAGGCAAATAAGAA  <  NZ_CP009273/3629062‑3628976
                                                                                                                                                                               
ATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCATCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                       >  1:2006229/1‑90
ATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                       >  1:915643/1‑90
ATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                       >  1:1843263/1‑90
ATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                       >  1:2153447/1‑90
ATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                       >  1:951387/1‑90
ATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                       >  2:1703399/1‑90
ATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                       >  1:1163993/1‑90
ATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                       >  2:116711/1‑90
ATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                       >  2:1576669/1‑90
 TTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA                                                                                      >  1:2436242/1‑90
 TTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA                                                                                      >  1:1507827/1‑90
 TTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA                                                                                      >  2:713085/1‑90
 TTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA                                                                                      >  1:1124311/1‑90
 TTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA                                                                                      >  1:1620721/1‑90
 TTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA                                                                                      >  1:1737042/1‑90
 TTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                       >  2:1965182/1‑89
      GGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAA                                                                                 <  1:1010634/90‑1
        GAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACA                                                                               >  1:2217849/1‑90
          GAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGACGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                        <  1:627545/79‑1
          GAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGACGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                        >  2:627545/1‑79
            AAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTA                                                                           <  2:2111807/90‑1
             AAAATCGGCTCAACCATGCAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTCCCCCGCTTCTTCGCACCTTCCCTAACCAACAGGTAC                                                                          <  1:2445927/90‑1
             AAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTAC                                                                          <  1:1942382/90‑1
             AAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTAC                                                                          <  1:2112467/90‑1
              AAATCGGCTCAAACATGAAGAAATGAAATGACTTAGTCATCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACG                                                                         <  2:199350/90‑1
              AAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACG                                                                         <  1:1742552/90‑1
              AAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACG                                                                         <  2:1260956/90‑1
              AAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACG                                                                         <  2:1762690/90‑1
              AAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACG                                                                         <  2:2153447/90‑1
              AAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACG                                                                         <  2:270552/90‑1
                  CGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTC                                                                     >  1:826455/1‑90
                   GGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCC                                                                    <  1:1236573/90‑1
                    GCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCA                                                                   <  2:826455/90‑1
                    GCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACG                                                                         <  2:536255/84‑1
                    GCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACG                                                                         >  1:536255/1‑84
                         AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCA                                                              <  2:1212779/90‑1
                         AACATAAAGAAATGAAATGACTAAGTCAGCCGAGAAGAATTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAG                                                             <  2:2479338/90‑1
                            ATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA                                                                                     <  2:1166830/64‑1
                             TGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACAAGTGC                                                          <  2:1124311/90‑1
                              GAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCC                                                         <  2:2217849/90‑1
                              GAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCC                                                         >  1:2023460/1‑90
                              GAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACG                                                                         >  2:2097583/1‑74
                              GAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACG                                                                         >  2:2271610/1‑74
                              GAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                        >  2:325664/1‑59
                              GAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                        <  1:325664/59‑1
                               AAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCA                                                        <  2:947888/90‑1
                                   AATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAG                                                    >  1:939358/1‑90
                                    ATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGC                                                   >  2:2301324/1‑90
                                     TGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCC                                                  >  2:157741/1‑90
                                        AATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGA                                               <  1:1616199/90‑1
                                        AATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGA                                               <  2:1598954/90‑1
                                           GACTTAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAA                                                                                 <  1:827335/53‑1
                                           GACTTAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAA                                                                                 >  2:827335/1‑53
                                           GACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTT                                            >  1:1002875/1‑90
                                           GACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTT                                            >  1:1829280/1‑90
                                             CTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTT                                          <  2:3658/90‑1
                                             CTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTT                                          <  2:764207/90‑1
                                             CTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTT                                          <  2:950104/90‑1
                                             CTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTT                                          <  2:134413/90‑1
                                             CTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTT                                          <  1:139773/90‑1
                                             CTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTT                                          >  1:2319698/1‑90
                                              TGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTG                                         <  2:1160591/90‑1
                                               GAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGA                                        >  2:317604/1‑90
                                               GAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCC                                                                    >  2:428522/1‑62
                                               GAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCC                                                                    <  1:428522/62‑1
                                                AGTCAGCCTAGAATAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAG                                       <  1:1067755/90‑1
                                                AGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCACTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAG                                       >  2:901148/1‑90
                                                  TCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACATGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAA                                     >  2:140435/1‑90
                                                   CAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAAT                                    <  2:541883/90‑1
                                                   CAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAAT                                    <  1:65459/90‑1
                                                   CAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAAT                                    <  1:1177758/90‑1
                                                   CAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAAT                                    <  2:2443378/90‑1
                                                     GCCGAGAATAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATAT                                  <  2:115279/90‑1
                                                     GCCGAGAATAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATAT                                  <  2:2225379/90‑1
                                                     GCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATAT                                  >  2:934965/1‑90
                                                     GCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATAT                                  >  2:888712/1‑90
                                                     GCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATAT                                  <  1:2365985/90‑1
                                                     GCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATAT                                  <  2:2398887/90‑1
                                                     GCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAAT                                    >  2:602489/1‑88
                                                       CGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTTCCAGTAGCCAGACTTTTGAGAATATGC                                <  1:1514831/90‑1
                                                       CGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGC                                <  2:2309730/90‑1
                                                       CGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGC                                <  2:191133/90‑1
                                                       CGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGC                                <  2:1330306/90‑1
                                                       CGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGC                                <  1:740541/90‑1
                                                        GAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTATCCAGACTTTTGAGAATATGCT                               <  1:772456/90‑1
                                                          GAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGT                             <  1:2301324/90‑1
                                                               ATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAG                        >  1:959419/1‑90
                                                                      CGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGATCATTC                 <  2:2154771/90‑1
                                                                       GCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGATCATTCC                >  1:2107114/1‑90
                                                                       GCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGATCATTCC                >  2:1816849/1‑90
                                                                            TTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGATCATTCCGAGGC           <  1:1939774/90‑1
                                                                            TTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGATCATTCCGAGGC           <  1:2266570/90‑1
                                                                                CACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGC                                >  2:168183/1‑65
                                                                                 ACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGATCATTCCGAGGTAAATA      <  1:1586067/90‑1
                                                                                 ACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGATCATTCCGAGGCAAATA      <  1:594633/90‑1
                                                                                 ACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGATC                     <  1:1388000/75‑1
                                                                                 ACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAAT                                    <  1:1486570/60‑1
                                                                                 ACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAAT                                    >  2:1486570/1‑60
                                                                                    TTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGATCATTCCGAGGCAAATAAGA   >  1:2489045/1‑90
                                                                                     TCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGATCATTCCGAGGCAAATAAGAA  >  2:939315/1‑90
                                                                                                                                                                               
ATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NZ_CP009273/2282485‑2282398
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGATCATTCCGAGGCAAATAAGAA  <  NZ_CP009273/3629062‑3628976

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.