Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1539469	1539508	40	3 [1]	[0] 2	BW25113_RS07710	leucine‑rich repeat domain‑containing protein

AGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTAACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGC  >  NZ_CP009273/1539396‑1539485                                                                         |                  aGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTAACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGc  <  2:65869/90‑1 (MQ=255)                                    ccGCACTAAAATAAGTAACTGATGAAAGCCTATCtata                   >  1:127451/1‑38 (MQ=255)                                    ccGCACTAAAATAAGTAACTGATGAAAGCCTATCtata                   <  2:127451/38‑1 (MQ=255)                                                                         |                  AGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTAACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGC  >  NZ_CP009273/1539396‑1539485

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑