Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2986279	2986295	17	3 [1]	[1] 2	ygeH	HilA family transcriptional regulator YgeH

AGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTTACGACTTCACCCCTGAAAGCATTTACAGGGCC  >  NZ_CP009273/2986189‑2986283                                                                                          |      aGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTTACGACTTCACCCCTGAAAGCATTTACa       <  1:346906/90‑1 (MQ=255) aGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTTACGACTTCACCCCTGAAAGCATTTACa       <  2:33430/90‑1 (MQ=255)      cAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTTACGACTTCACCCCTGAAAGCATTTACAGGGcc  <  1:290780/90‑1 (MQ=255)                                                                                          |      AGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTTACGACTTCACCCCTGAAAGCATTTACAGGGCC  >  NZ_CP009273/2986189‑2986283

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑