Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2986279	2986295	17	3 [1]	[1] 2	ygeH	HilA family transcriptional regulator YgeH

TATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGTCTTTGGCACTTCAT  >  NZ_CP009273/2986289‑2986385        |                                                                                          tataTTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGTCTTTGGc         >  2:346046/1‑90 (MQ=255)        gATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGTCTTTGGCACTTCAt  >  2:316562/1‑90 (MQ=255)        |                                                                                          TATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGTCTTTGGCACTTCAT  >  NZ_CP009273/2986289‑2986385

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑