New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP009273	754093 =	14 (0.980)	3 (0.230)	3/154	1.1	21.7%	intergenic (+232/‑69)	sdhB/sucA	succinate dehydrogenase iron‑sulfur subunit SdhB/2‑oxoglutarate dehydrogenase E1 component
	?	NZ_CP009273	754113 =	9 (0.700)					intergenic (+252/‑49)	sdhB/sucA	succinate dehydrogenase iron‑sulfur subunit SdhB/2‑oxoglutarate dehydrogenase E1 component

CTTTAAAAA‑CTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCT  >  NZ_CP009273/754005‑754176                                                                                          |                                                                                    cTTTAAAAA‑CTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGgca                                                                                    >  2:4300/1‑90 (MQ=255)  tttAAAAACCTCCCCCTGACACAAAGACATTTTTAAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGgca                                                                                    <  1:202408/90‑1 (MQ=255)  agaagagtccaaccaggctttcaaagcgctgttctgcatcgtgatcccttaagcatcttttttatgcttacttcgccgtggatactacCa                                                                                    >  1:108813‑M1/89‑90 (MQ=255)      aaac‑CTCCCCCTGACACAAAGACATTTTTAAAAGGTTCCTCCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGgcacgcac                                                                               <  1:202376/90‑1 (MQ=255)        gtccaaccaggctttcaaagcgctgttctgcatcgtgatcccttaagcatcttttttatgcttacttcgccgtggatactacCACGcaca                                                                              <  1:225702‑M1/8‑1 (MQ=255)           cTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCa                                                                           >  2:204991/1‑90 (MQ=255)              ccccTGACACAAAGACTTTTTTAAAAGTTTCCTTCGGGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACtg                                                                        <  2:291917/90‑1 (MQ=255)                aggctttcaaagcgctgttctgcatcgtgatcccttaagcatcttttttatgcttacttcgccgtggatactacCACg                                                                                  >  1:238298‑M1/75‑78 (MQ=255)                aggctttcaaagcgctgttctgcatcgtgatcccttaagcatcttttttatgcttacttcgccgtggatactacCACg                                                                                  <  2:238298‑M1/4‑1 (MQ=255)                   gACACTAAGAATTTTTTTAAAGCTCCCTCCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGt                                                                   <  2:53382/90‑1 (MQ=255)                               gTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCAc                                                       >  2:197701/1‑90 (MQ=255)                                         gTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTaa                                             >  1:226321/1‑90 (MQ=255)                                          gtgatcccttaagcatcttttttatgcttacttcgccgtggatactacCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAg                                            <  1:103992‑M1/42‑1 (MQ=255)                                           tCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGc                                           >  1:108374/1‑90 (MQ=255)                                                    aagcatcttttttatgcttacttcgccgtggatactacCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAg                                  <  2:76257‑M1/52‑1 (MQ=255)                                                     gCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGa                                 <  1:4300/90‑1 (MQ=255)                                                     gCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGa                                 <  1:265495/90‑1 (MQ=255)                                                         tcttttttatgcttacttcgccgtggatactacCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCt                             <  2:228429‑M1/57‑1 (MQ=255)                                                                     gagCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACg                 >  2:124355/1‑90 (MQ=255)                                                                       gCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGAt               >  1:362260/1‑90 (MQ=255)                                                                                    ccccGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCt  >  1:26333/1‑90 (MQ=255)                                                                                          |                                                                                    CTTTAAAAA‑CTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCT  >  NZ_CP009273/754005‑754176

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.