| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 754093 = | 14 (0.980) | 3 (0.230) | 3/154 | 1.1 | 21.7% | intergenic (+232/‑69) | sdhB/sucA | succinate dehydrogenase iron‑sulfur subunit SdhB/2‑oxoglutarate dehydrogenase E1 component |
| ? | NZ_CP009273 | 754113 = | 9 (0.700) | intergenic (+252/‑49) | sdhB/sucA | succinate dehydrogenase iron‑sulfur subunit SdhB/2‑oxoglutarate dehydrogenase E1 component | |||||
GTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGTTGGACTCTTCT > NZ_CP009273/754034‑754200 | gTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCAc > 2:197701/1‑90 (MQ=255) gTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTaa > 1:226321/1‑90 (MQ=255) gtgatcccttaagcatcttttttatgcttacttcgccgtggatactacCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAg < 1:103992‑M1/42‑1 (MQ=255) tCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGc > 1:108374/1‑90 (MQ=255) aagcatcttttttatgcttacttcgccgtggatactacCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAg < 2:76257‑M1/52‑1 (MQ=255) gCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGa < 1:4300/90‑1 (MQ=255) gCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGa < 1:265495/90‑1 (MQ=255) agcatcttttttatgcttacttcgccgtggatactaccacgcacagtgatgtgcgtgGTAGTATCCACGGCGAAGTAAGCATAAAAAAGa < 2:228429‑M2/33‑1 (MQ=255) tcttttttatgcttacttcgccgtggatactacCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCt < 2:228429‑M1/57‑1 (MQ=255) cttttttatgcttacttcgccgtggatactaccacgcacagtgatgtgcgtgGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCtt < 2:76257‑M2/38‑1 (MQ=255) cttacttcgccgtggatactaccacgcacagtgatgtgcgtgGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCAc < 1:103992‑M2/48‑1 (MQ=255) gagCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACg > 2:124355/1‑90 (MQ=255) gCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGAt > 1:362260/1‑90 (MQ=255) ccccGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCt > 1:26333/1‑90 (MQ=255) tCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGtt > 1:242677/1‑90 (MQ=255) tgtgcgtgGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGTTGGAc < 1:225702‑M2/82‑1 (MQ=255) cgtgGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCt > 1:238298‑M2/5‑78 (MQ=255) cgtgGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCt < 2:238298‑M2/74‑1 (MQ=255) tgGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGTTGGACtcttct > 1:108813‑M2/3‑90 (MQ=255) | GTTTTTAAAGGTTCCTTCGCGAGCCACTACGTAGACAAGAGCTCGCAAGTGAACCCCGGCACGCACATCACTGTGCGTGGTAGTATCCACGGCGAAGTAAGCATAAAAAAGATGCTTAAGGGATCACGATGCAGAACAGCGCTTTGAAAGCCTGGTTGGACTCTTCT > NZ_CP009273/754034‑754200 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |