Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1700629	1700674	46	2 [1]	[1] 5	rsxB	electron transport complex subunit RsxB

TTTGGCGCCATTCTGGGTTATGCCTCCCGCCGTTTTGCGGTGGAAGACGATCCGGTCGTTGAGAAAATTGACGAAATCTTACCGCAGAGCCAGTGTGGTCAGTGCGGTT  >  NZ_CP009273/1700656‑1700764                    |                                                                                          tgtGGCGCCTTTGTGGTTTACCCCCCCCGCCGTTTTGCGGTGGAAGACGATCCGGTCGTTGAGAAAATTGACGAAATCTTACCGCAGAGc                     <  2:180462/88‑1 (MQ=255)                    aTGCCTCCCGCCGTTTTGCGGTGGAAGACGATCCGGTCGTTg                                                  >  1:225484/1‑42 (MQ=255)                    aTGCCTCCCGCCGTTTTGCGGTGGAAGACGATCCGGTCGTTGAGAAAATTGACGAAATCTTACCGCAGAGCCAGTGTGGTCAGTGCGGtt  >  1:166508/1‑90 (MQ=255)                    aTGCCTCCCGCCGTTTTGCGGTGGAAGACGATCCGGTCGTTGAGAAAATTGACGAAATCTTACCGCAGAGCCAGTGTGGTCAGTGCGGtt  >  1:198216/1‑90 (MQ=255)                    aTGCCCCCCGCCGTTTTGCGGTGGAAGACGATCCGGTCGTTg                                                  <  2:225484/42‑1 (MQ=255)                    |                                                                                          TTTGGCGCCATTCTGGGTTATGCCTCCCGCCGTTTTGCGGTGGAAGACGATCCGGTCGTTGAGAAAATTGACGAAATCTTACCGCAGAGCCAGTGTGGTCAGTGCGGTT  >  NZ_CP009273/1700656‑1700764

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑