Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1229260	1229274	15	2 [1]	[0] 3	nhaB	Na(+)/H(+) antiporter NhaB

ATCAGACGGATTTTATCCTGACGGGTACGCTGGTGGCGGCTTTGATCGTCAAACTGTTGCAACACTTCGCGGACTTTCTCCGGCAGCGTT  >  NZ_CP009273/1229275‑1229364 |                                                                                          aTCAGACGGATTTTATCCTGACGGGTACGCTGGTGGCGGCTTTGATCGTCAAACt                                     <  1:270203/55‑1 (MQ=255) aTCAGACGGATTTTATCCTGACGGGTACGCTGGTGGCGGCTTTGATCGTCAAACt                                     >  2:270203/1‑55 (MQ=255) aTCAGACGGATTTTATCCTGACGGGTACGCTGGTGGCGGCTTTGATCGTCAAACTGTTGCAACACTTCGCGGACTTTCTCCGGCAGCGtt  >  2:541086/1‑90 (MQ=255) |                                                                                          ATCAGACGGATTTTATCCTGACGGGTACGCTGGTGGCGGCTTTGATCGTCAAACTGTTGCAACACTTCGCGGACTTTCTCCGGCAGCGTT  >  NZ_CP009273/1229275‑1229364

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑