Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2440252	2440257	6	2 [0]	[1] 2	aroC	chorismate synthase

GTCGCCAATTTCCACGCCTTTCACCGCGTTGATGCTCATC  >  NZ_CP009273/2440212‑2440251                                        | gTCGCCAATTTCCACGCCTTTCACCGCGTTGATGCtcatc  >  1:214312/1‑40 (MQ=255) gTCGCCAATTTCCACGCCTTTCACCGCGTTGATGCtcatc  <  2:214312/40‑1 (MQ=255)                                        | GTCGCCAATTTCCACGCCTTTCACCGCGTTGATGCTCATC  >  NZ_CP009273/2440212‑2440251

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑