Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2440252	2440257	6	2 [0]	[1] 2	aroC	chorismate synthase

GCGCATGGGCGATGTCAGCATCCAGGCGGTCAAAGACCGGCTCGCCAAGTCCGGCAGGAACGCCACTGGCAACAACGGTGACTTTAGCGCCGATG  >  NZ_CP009273/2440253‑2440347      |                                                                                          gcgcATGGGCGATGTCAGCATCCAGGCGGTCAAAGACCGGCTCGCCAAGTCCGGCAGGGACGCCCCCGGCAACAACGGGGGCTTTAgcgc       >  1:195195/1‑90 (MQ=255)      tGGGCGATGTCAGCATCCAGGCGGTCAAAGACCGGCTCCCCAAGTCCGGCAGGAACGCCCCTGGCAACAACGGTGACTTTAGCGCCGATg  >  1:84462/1‑90 (MQ=255)      |                                                                                          GCGCATGGGCGATGTCAGCATCCAGGCGGTCAAAGACCGGCTCGCCAAGTCCGGCAGGAACGCCACTGGCAACAACGGTGACTTTAGCGCCGATG  >  NZ_CP009273/2440253‑2440347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑