Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NZ_CP009273 1067189 1067243 55 2 [1] [1] 2 [rutD]–[rutC] [rutD],[rutC]

GTGAGAGTGAAAGTTTCATCGCGGCCTCACTTGGCGATATGCGCAATTGTGGCGATTTCCACCAGCGCGTCAGGTTTTACCAGTCCGCACTGAATGCAGAATCGCGCCGGTTTATCACCCGGAAAAAACTC  >  NZ_CP009273/1067203‑1067333
                                         |                                                                                         
gTGAGAGTGAAAGTTTCATCGCGGCCTCACTTGGCGATATGCGCAATTGTGGCGATTTCCACCAGCGCGTCAGGTTTTACCAGTCCGCAc                                           >  1:78897/1‑90 (MQ=255)
                                         cgcAATTGTGGCGATTTCCACCAGCGCGTCAGGTTTTACCAGTCCGCACTGAATGCAGAATCGCGCCGGTTTATCACCCGGAAAAAACTc  <  2:33776/90‑1 (MQ=255)
                                         |                                                                                         
GTGAGAGTGAAAGTTTCATCGCGGCCTCACTTGGCGATATGCGCAATTGTGGCGATTTCCACCAGCGCGTCAGGTTTTACCAGTCCGCACTGAATGCAGAATCGCGCCGGTTTATCACCCGGAAAAAACTC  >  NZ_CP009273/1067203‑1067333

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: