Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1539028	1539038	11	3 [0]	[1] 5	BW25113_RS07710	leucine‑rich repeat domain‑containing protein

TTTATTATGGGGAATAAAGTTCCAATATCGGATGTATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAG  >  NZ_CP009273/1539031‑1539128         |                                                                                          tttATTATGGGGAATAAAGTTCCAATATCGGATGTATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATa          <  2:55680/90‑1 (MQ=255)         ggggAATAAAGTTCCAATATCGGATGTATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGAt       <  1:15504/85‑1 (MQ=255)         ggggAATAAAGTTCCAATATCGGATGTATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGAt       >  2:15504/1‑85 (MQ=255)         ggggAATAAAGTTCCAATATCGGATGTATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAg  >  2:196274/1‑90 (MQ=255)         ggggAATAAAGTTCCAATATCGGATGTATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAg  >  2:84530/1‑90 (MQ=255)         |                                                                                          TTTATTATGGGGAATAAAGTTCCAATATCGGATGTATTATTAGTATCAATGTGGGTTATTTTATTATTGTCCAGTCTTAAACTTTTGATAGATGGAAG  >  NZ_CP009273/1539031‑1539128

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑