Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2792415	2792428	14	2 [1]	[0] 4	stpA/alaE	DNA‑binding protein StpA/L‑alanine exporter AlaE

GCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATT  >  NZ_CP009273/2792325‑2792417                                                                                          |    gCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGGATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTg     >  2:323115/1‑90 (MQ=255)    tgaaaaaaTCCACAATGTAAAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGAtt  <  2:222413/87‑1 (MQ=255)                                                                                          |    GCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATT  >  NZ_CP009273/2792325‑2792417

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑