Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3639565	3639656	92	2 [1]	[1] 2	[rlmJ]	[rlmJ]

ACCCGCCGTGGAAACTGGAACAACAGATGAATAACGTGCTGCCGTGGCTGCACAGCAAACTGGTTCCGGCAGGCACCGGGCACGCCACCGTAAGCTGGATCGTGCCGGAGTAATTGCAGCCAT  >  NZ_CP009273/3639475‑3639597                                                                                          |                                  aCCCGCCGTGGAAACTGGAACAACAGATGAATAACGTGCTGCCGTGGCTGCACAGCAAACTGGTTCCGGCAGGCACCGGGCACGCCACCg                                   <  1:52402/90‑1 (MQ=255)                                  aCGTGCTGCCGTGGCTGCACAGCAAACTGGTTCCGGCAGGCACCGGGCACGCCACCGTAAGCTGGATCGTGCCGGAGTAATTGCAGCCAt  >  1:234773/1‑90 (MQ=255)                                                                                          |                                  ACCCGCCGTGGAAACTGGAACAACAGATGAATAACGTGCTGCCGTGGCTGCACAGCAAACTGGTTCCGGCAGGCACCGGGCACGCCACCGTAAGCTGGATCGTGCCGGAGTAATTGCAGCCAT  >  NZ_CP009273/3639475‑3639597

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑