Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3639565	3639656	92	2 [1]	[1] 2	[rlmJ]	[rlmJ]

CTACAATCGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCTCCATCAACCGCGCGGCTATGTACGGCCAGAAAT  >  NZ_CP009273/3639622‑3639746                                    |                                                                                          cTACAATCGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGc                                     <  2:157581/90‑1 (MQ=255)                                    tCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCCCCATCAACCCCCCGGCTATGTACGGCCCGaaaa  >  1:222470/1‑89 (MQ=255)                                    |                                                                                          CTACAATCGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCTCCATCAACCGCGCGGCTATGTACGGCCAGAAAT  >  NZ_CP009273/3639622‑3639746

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑