| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 360104 = | NA (NA) | 73 (3.940) | 32/168 | 0.0 | NA | intergenic (‑35/+251) | lacZ/BW25113_RS23320 | beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein |
| ? | NZ_CP009273 | = 360286 | NA (NA) | intergenic (‑217/+69) | lacZ/BW25113_RS23320 | beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein | |||||
ACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP009273/360191‑360104‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCC < NZ_CP009273/360286‑360200 ACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAA > 2:462221/1‑90ACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAA > 1:504211/1‑90ACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAA > 1:456605/1‑90ACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAA > 1:437929/1‑90ACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAA > 1:296982/1‑90ACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAA > 1:26548/1‑90 AATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTC > 2:8876/1‑90 AATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTC > 2:267285/1‑90 AATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTC > 1:10654/1‑90 AATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTC > 1:510017/1‑90 AATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTC > 2:530285/1‑90 AATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTC > 1:131543/1‑90 AATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTC > 1:124168/1‑90 CGCGGGGGGCGGTTTTGAACGTTGCGAAGCAACGGCCC‑GGGGGGGGGGGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTCCCCA < 2:14248/90‑1 CGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTCCCCA > 2:324543/1‑90 GCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTCCCCAG > 1:137360/1‑90 GCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTCCCCAG > 1:221330/1‑90 GCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTCCCCAG > 1:352269/1‑90 GATTTGAACGTTGCGAAGCAACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATA > 2:452885/1‑90 TTGCGAAGCAACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGG > 1:219232/1‑90 TTGCGAAGCAACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGG > 1:39704/1‑90 GCGAAGCACCGGCCG‑GGGGGGGGGGGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCT < 2:57104/90‑1 gagGCAGCGGCCG‑GGGGGGGGGCGGGCG‑GGCCCCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCA < 2:333666/87‑1 aAAGCAACGGCCG‑GGGGGGGGGGGGGCA‑GGACCCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCA < 2:131543/89‑1 GAAGCACGGGCCG‑GGGGGGGGGGGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCA < 2:212220/90‑1 GAAGAACCGGCCG‑GGGGGGGGGGGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCA < 2:181306/90‑1 aaaCAACGGCCCGGGGGGGGGGGGGGCA‑GGCCCCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCA < 2:155391/87‑1 ACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAA > 2:127671/1‑90 ACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAA > 2:505173/1‑90 ACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAA > 2:326803/1‑90 ACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAA > 1:333666/1‑90 ACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAA > 1:212220/1‑90 ACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAA > 1:215018/1‑90 cGCCC‑GGGGGGGGGGGGGGAGGGCCGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAA < 2:65842/89‑1 CC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACT > 1:155737/1‑90 GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGG > 2:137963/1‑90 ggGGGGGGCGGGCA‑GACCCCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGG < 1:426957/88‑1 TGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTT > 2:351235/1‑90 TGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTT > 1:533031/1‑90 gggGGGCA‑GGCCGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTC < 2:55961/87‑1 gggGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAA < 1:417123/61‑1 GGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAA > 2:417123/1‑64 ggcCGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATC < 1:527854/87‑1 ggcCGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATC < 2:498591/87‑1 GGACGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATC > 1:59367/1‑90 ACGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTG > 2:5825/1‑90 ccCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGT < 2:110341/88‑1 CGCCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGT < 2:215018/90‑1 CCCGCCATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTG > 2:409341/1‑90 CATAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGT > 2:119439/1‑90 TAAACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCG < 1:19819/90‑1 ACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTG < 2:477219/90‑1 ACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTG < 2:390059/90‑1 ACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTG < 1:324543/90‑1 ACTGCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTG > 2:342398/1‑90 GCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAAC > 1:96222/1‑90 GCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAAC > 1:114005/1‑90 GCCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAAC > 1:523999/1‑90 CCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTT < 2:148868/67‑1 CCAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTT > 1:148868/1‑67 CAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC < 2:124168/90‑1 CAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC < 2:437929/90‑1 CAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC < 1:9144/90‑1 CAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC < 1:505173/90‑1 CAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC < 1:452885/90‑1 CAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC < 2:504211/90‑1 CAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC < 1:449163/90‑1 CAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC < 1:255250/90‑1 CAGGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC < 1:205093/90‑1 GGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTC < 1:113658/90‑1 GGAATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTC < 2:219232/90‑1 ATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCC < 1:342398/90‑1 ATTAATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCC < 2:353242/90‑1 ACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCC‑GGAGGGTGGCGGGCA‑GGACGCCCGCCATAAACTGCCAGGAATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP009273/360191‑360104‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATTCCCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCC < NZ_CP009273/360286‑360200 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |