New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP009273 = 268840139 (0.820)5 (0.100)
+GCCCT
3/138 3.8 11.0% coding (502/3888 nt) purL phosphoribosylformylglycinamidine synthase
?NZ_CP009273 2688402 = 42 (0.790)coding (501/3888 nt) purL phosphoribosylformylglycinamidine synthase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTGAAAGCATCCTGCAGATAGTCAATTTCATCTTCCGCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NZ_CP009273/2688319‑2688401
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGCAAACAACTGCTCTGCATCA  >  NZ_CP009273/2688402‑2688471
                                                                                   |||||                                                                      
GTGAAAGCATCCTGCAGATAGTCAATTTCATCTTCCGCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACGGCCCTGC                                                                      >  2:1570345/1‑90
 TGAAAGCATCCTGCAGATAGTCAATTTCATCTTCCGCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACGGCCCTGCC                                                                     <  2:926098/90‑1
                              TCTTCCGCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACGGCCCTGCCCTGCCCCAGCAAATCAACGCTGGTAACCG                                        >  1:1575214/1‑90
                                    GCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACGGCCCTGCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCG                                  <  2:1575214/90‑1
                                                                    GATCAGCGCCTGACGGCCCTGCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGCAAACAACTGCTCTGCATCA  >  1:159346/1‑90
                                                                                   |||||                                                                      
GTGAAAGCATCCTGCAGATAGTCAATTTCATCTTCCGCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NZ_CP009273/2688319‑2688401
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGCAAACAACTGCTCTGCATCA  >  NZ_CP009273/2688402‑2688471

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.