| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 2688401 | 39 (0.820) | 5 (0.100) +GCCCT |
3/138 | 3.8 | 11.0% | coding (502/3888 nt) | purL | phosphoribosylformylglycinamidine synthase |
| ? | NZ_CP009273 | 2688402 = | 42 (0.790) | coding (501/3888 nt) | purL | phosphoribosylformylglycinamidine synthase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AAGCTTTGTGAAAGCATCCTGCAGATAGTCAATTTCATCTTCCGCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGCAAACAACTGCTCTGCATCATCTAAAGCAAAAAAGA > NZ_CP009273/2688312‑2688487 | aaGCTTTGTGAAAGCATCCTGCAGATAGTCAATTTCATCTTCCGCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACg > 1:1149171/1‑90 (MQ=255) gtgAAAGCATCCTGCAGATAGTCAATTTCATCTTCCGCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGc > 2:1570345/1‑90 (MQ=255) tgAAAGCATCCTGCAGATAGTCAATTTCATCTTCCGCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGcc < 2:926098/90‑1 (MQ=255) aGCATCCTGCAGATAGTCAATTTCATCTTCCGCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAg > 2:1291668/1‑90 (MQ=255) ccTGCAGATAGTCAATTTCATCTTCCGCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAAt > 1:1601358/1‑90 (MQ=255) cAGATAGTCAATTTCATCTTCCGCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAAc < 1:1016174/90‑1 (MQ=255) gATAGTCAATTTCATCTTCCGCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGc < 2:506463/90‑1 (MQ=255) tAGTCAATTTCATCTTCCGCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTg > 1:390870/1‑90 (MQ=255) aGTCAATTTCATCTTCCGCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTgg < 1:1291668/90‑1 (MQ=255) gTCAATTTCATCTTCCGCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGt > 1:508902/1‑90 (MQ=255) aaTTTCATCTTCCGCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAAc > 2:606046/1‑90 (MQ=255) aTTTCATCTTCCGCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAAcc > 1:1417266/1‑90 (MQ=255) aTCTTCCGCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGt < 1:1310592/90‑1 (MQ=255) aTCTTCCGCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGt < 1:606046/90‑1 (MQ=255) tCTTCCGCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACGGCCCTGCCCTGCCCCAGCAAATCAACGCTGGTAACCg > 1:1575214/1‑90 (MQ=255) ccGCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGtt > 2:806685/1‑90 (MQ=255) cGCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTg > 2:1112933/1‑90 (MQ=255) gCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACGGCCCTGCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCg < 2:1575214/90‑1 (MQ=255) gagCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGAtggt > 2:441864/1‑90 (MQ=255) caagccaagACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGc < 1:1112933/90‑1 (MQ=255) agACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGCAaacaac < 1:696939/90‑1 (MQ=255) agACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGCAaacaac < 1:821687/90‑1 (MQ=255) agACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGCAaacaac < 2:45048/90‑1 (MQ=255) agACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGCAaacaac < 2:1417266/90‑1 (MQ=255) agACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGCAaacaac < 2:1527950/90‑1 (MQ=255) gCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGCAAACAACTGct < 1:806685/90‑1 (MQ=255) cAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGCAAACAACTGctc < 2:600431/90‑1 (MQ=255) cAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGCAAACAACTGctc < 1:249007/90‑1 (MQ=255) aGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGCAAACAACTGctct > 1:236643/1‑90 (MQ=255) tAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGAtgg < 2:651045/68‑1 (MQ=255) tAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGAtgg > 1:651045/1‑68 (MQ=255) tAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGCAAACAACTGCTCTGcat < 2:1588100/90‑1 (MQ=255) gTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGc > 1:1015575/1‑69 (MQ=255) gTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGc < 2:1015575/69‑1 (MQ=255) cGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGT‑GGCAAACAACTGCTCTGCATCATCTaa < 2:1167303/90‑1 (MQ=255) gATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGtt < 1:117294/56‑1 (MQ=255) gATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGtt > 2:117294/1‑56 (MQ=255) gATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGCAAACAACTGCTCTGcat > 2:204921/1‑83 (MQ=255) gATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGCAAACAACTGCTCTGcat < 1:204921/83‑1 (MQ=255) gATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGCAAACAACTGCTCTGCATCATCTaa > 2:30936/1‑90 (MQ=255) gATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGCAAACAACTGCTCTGCATCATCTaa > 1:524620/1‑90 (MQ=255) tCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGCAAACAACTGCTCTGCATCATCTAAAg < 1:639883/90‑1 (MQ=255) gcgcCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGCaa > 2:390897/1‑63 (MQ=255) gcgcCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGCaa < 1:390897/63‑1 (MQ=255) gcCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGtt > 2:505991/1‑49 (MQ=255) gcCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGtt < 1:505991/49‑1 (MQ=255) gACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGCAAACAACTGCTCTGCATCATCTAAAGCAAAAAAGa < 1:1175482/90‑1 (MQ=255) | AAGCTTTGTGAAAGCATCCTGCAGATAGTCAATTTCATCTTCCGCCAGAGCCAAGCCAAGACGCAGGTTAGCGTCGATCAGCGCCTGACG‑‑‑‑‑GCCCTGCCCCAGCAAATCAACGCTGGTAACCGGAGTCGGTTGATGGTGGGCAAACAACTGCTCTGCATCATCTAAAGCAAAAAAGA > NZ_CP009273/2688312‑2688487 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |