| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 3493871 | 23 (0.880) | 3 (0.130) | 3/138 | 1.9 | 13.5% | coding (603/1338 nt) | frlA | fructoselysine/psicoselysine transporter |
| ? | NZ_CP009273 | = 3494083 | 18 (0.780) | coding (815/1338 nt) | frlA | fructoselysine/psicoselysine transporter | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGGGATCTTCTGGTTTAAAGCGGAGAATTTTGCCGCCCCTACCACCACTGCGATTGGCGCAACGGGCAGCTTTATGGCGCTGCTGGCGGGGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP009273/3493778‑3493871‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggggatcCAGGTCAGGGCGTCGGAAATCGGCGTTTCAGAATTGGCGAGTTTGTCGAAGGGCATCAGGCCGGAAATCACCAGCGCCAGCAG < NZ_CP009273/3494083‑3494001 TGGGATCTTCTGGTTTAAAGCGGAGAATTTTGCCGCCCCTACCACCACTGCGATTGGCGCAACGGGCAGCTTTATGGCGCTGCTGGCGGG > 1:607719/1‑90TGGGATCTTCTGGTTTAAAGCGGAGAATTTTGCCGCCCCTACCACCACTGCGATTGGCGCAACGGGCAGCTTTATGGCGCTGCTGGCGGG > 2:345558/1‑90TGGGATCTTCTGGTTTAAAGCGGAGAATTTTGCCGCCCCTACCACCACTGCGATTGGCGCAACGGGCAGCTTTATGGCGCTGCTGGCGGG > 2:419999/1‑90 GGGATCTTCTGGTTTAAAGCGGAGAATTTTGCCGCCCCTACCACCACTGCGATTGGCGCAACGGGCAGCTTTATGGCGCTGCTGGCGGGG < 1:345558/90‑1 GGGATCTTCTGGTTTAAAGCGGAGAATTTTGCCGCCCCTACCACCACTGCGATTGGCGCAACGGGCAGCTTTATGGCGCTGCTGGCGGGG < 1:741189/90‑1 TTCTGGTTTAAAGCGGAGAATTTTGCCGCCCCTACCACCACTGCGATTGGCGCAACGGGCAGCTTTATGGCGCTGCTGGCGGGGATCCct > 1:455484/1‑88 GGTTTAAAGCGGAGAATTTTGCCGCCCCTACCACCACTGCGATTGGCGCAACGGGCAGCTTTATGGCGCTGCTGGCGG < 1:565596/78‑1 GGTTTAAAGCGGAGAATTTTGCCGCCCCTACCACCACTGCGATTGGCGCAACGGGCAGCTTTATGGCGCTGCTGGCGG > 2:565596/1‑78 CTGCGATTGGCGCAACGGGCAGCTTTATGGCGCTGCTGGCGGGGATCCAGGTCAGGGCGTCG > 1:303136/1‑62 CTGCGATTGGCGCAACGGGCAGCTTTATGGCGCTGCTGGCGGGGATCCAGGTCAGGGCGTCG < 2:303136/62‑1 GGGGATCCAGGTCAGGGCGTCGGAAATCGGCGTTTCAGAATTGGCGAGTTTGTCGAAGGGCATCAGGCCGGAAATCACCAGCGCCAGCAG < 1:282619/90‑1 GGGGATCCAGGTCAGGGCGTCGGAAATCGGCGTTTCAGAATTGGCGAGTTTGTCGAAGGGCATCAGGCCGGAAATCACCAGCGCCAGCAG < 2:346415/90‑1 GGGGATCCAGGTCAGGGCGTCGGAAATCGGCGTTTCAGAATTGGCGAGTTTGTCGAAGGGCATCAGGCCGGAAATCACCAGCGCCAGCAG < 2:516208/90‑1 GGGGATCCAGGTCAGGGCGTCGGAAATCGGCGTTTCAGAATTGGCGAGTTTGTCGAAGGGCATCAGGCCGGAAATCACCAGCGCCAGCAG < 2:57550/90‑1 GGGGATCCAGGTCAGGGCGTCGGAAATCGGCGTTTCAGAATTGGCGAGTTTGTCGAAGGGCATCAGGCCGGAAATCACCAGCGCCAGCAG < 2:716206/90‑1 TGGGATCTTCTGGTTTAAAGCGGAGAATTTTGCCGCCCCTACCACCACTGCGATTGGCGCAACGGGCAGCTTTATGGCGCTGCTGGCGGGGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP009273/3493778‑3493871‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggggatcCAGGTCAGGGCGTCGGAAATCGGCGTTTCAGAATTGGCGAGTTTGTCGAAGGGCATCAGGCCGGAAATCACCAGCGCCAGCAG < NZ_CP009273/3494083‑3494001 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |