| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 3493871 | 23 (0.880) | 3 (0.130) | 3/138 | 1.9 | 13.5% | coding (603/1338 nt) | frlA | fructoselysine/psicoselysine transporter |
| ? | NZ_CP009273 | = 3494083 | 18 (0.780) | coding (815/1338 nt) | frlA | fructoselysine/psicoselysine transporter | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CTGCTGGCGCTGGTGATTTCCGGCCTGATGCCCTTCGACAAACTCGCCAATTCTGAAACGCCGATTTCCGACGCCCTGACCTGGATCCCCGCACTCGGCAGCACCGCTGGGATCTTTGTTGCCATCACGGCGATGATCGTCATTCTTGGTTCGCTTTCCAGCTGCGTGATGT > NZ_CP009273/3494001‑3494172 | ctgctgGCGCTGGTGATTTCCGGCCTGATGCCCTTCGACAAACTCGCCAATTCTGAAACGCCGATTTCCGACGCCCTGACCTGgatcccc < 2:516208‑M2/90‑8 (MQ=255)ctgctgGCGCTGGTGATTTCCGGCCTGATGCCCTTCGACAAACTCGCCAATTCTGAAACGCCGATTTCCGACGCCCTGACCTGgatcccc < 1:282619‑M2/90‑8 (MQ=255)ctgctgGCGCTGGTGATTTCCGGCCTGATGCCCTTCGACAAACTCGCCAATTCTGAAACGCCGATTTCCGACGCCCTGACCTGgatcccc < 2:346415‑M2/90‑8 (MQ=255)ctgctgGCGCTGGTGATTTCCGGCCTGATGCCCTTCGACAAACTCGCCAATTCTGAAACGCCGATTTCCGACGCCCTGACCTGgatcccc < 2:57550‑M2/90‑8 (MQ=255)ctgctgGCGCTGGTGATTTCCGGCCTGATGCCCTTCGACAAACTCGCCAATTCTGAAACGCCGATTTCCGACGCCCTGACCTGgatcccc < 2:716206‑M2/90‑8 (MQ=255) ctgGCGCTGGTGATTTCCGGCCTGATGCCCTTCGACAAACTCGCCAATTCTGAAACGCCGATTTCCGACGCCCTGACCTGGATCCCCGCa > 1:458763/1‑90 (MQ=255) tGGTGATTTCCGGCCTGATGCCCTTCGACAAACTCGCCAATTCTGAAACGCCGATTTCCGACGCCCTGACCTGGATCCCCGCACTCGgca > 2:114293/1‑90 (MQ=255) ttCCGGCCTGATGCCCTTCGACAAACTCGCCAATTCTGAAACGCCGATTTCCGACGCCCTGACCTGGATCCCCGCACTCGGCAGCACCGc < 1:516208/90‑1 (MQ=255) ttCCGGCCTGATGCCCTTCGACAAACTCGCCAATTCTGAAACGCCGATTTCCGACGCCCTGACCTGGATCCCCGCACTCGGCAGCACCGc < 1:716206/90‑1 (MQ=255) ggCCTGATGCCCTTCGACAAACTCGCCAATTCTGAAACGCCGATTTCCGACGCCCTGACCTGGATCCCCGCACTCGGCAGCACCGCTggg > 2:864232/1‑90 (MQ=255) ggCCTGATGCCCTTCGACAAACTCGCCAATTCTGAAACGCCGATTTCCGACGCCCTGACCTGGATCCCCGCACTCGGCAGCACCGCTggg > 2:699209/1‑90 (MQ=255) cTCGCCAATTCTGAAACGCCGATTTCCGACGCCCTGACCTGGATCCCCGCACTCGGCAGCACCGCTGGGATCTTTGTTGCCATCACGGCg > 2:754371/1‑90 (MQ=255) tCGCCAATTCTGAAACGCCGATTTCCGACGCCCTGACCTGGATCCCCGCACTCGGCAGCACCGCTGGGATCTTTGTTGCCATCACGGCga < 2:458763/90‑1 (MQ=255) ccGATTTCCGACGCCCTGACCTGGATCCCCGCACTCGGCAGCAc < 1:685878/44‑1 (MQ=255) ccGATTTCCGACGCCCTGACCGGGATCCCCGCACTCGGCAGCAc > 2:685878/1‑44 (MQ=255) cGACGCCCTGACCTGgatccccgccagcagcgccataaagctgcccgttgcgccaatcgcag < 2:303136‑M2/62‑48 (MQ=255) cGACGCCCTGACCTGgatccccgccagcagcgccataaagctgcccgttgcgccaatcgcag > 1:303136‑M2/1‑15 (MQ=255) gACGCCCTGACCTGGATCCCCGCACTCGGCAGCACCGCTGGGATCTTTGTTGCCATCACGGCGATGATCGTCATTCTTGGTTCGCTTTcc < 2:282619/90‑1 (MQ=255) gCCCTGACCTGGATCCCCGCACTCGGCAGCACCGCTGGGATCTTTGTTGCCATCACGGCGATGATCGTCATTCTTGGTTCGCTTTCCAGc > 2:516214/1‑90 (MQ=255) ccTGACCTGGATCCCCGCACTCGGCAGCACCGCTGGGATCTTTGTTGCCATCACGGCGATGATCGTCATTCTTGGTTCGCTTTCCAGCTg < 1:21199/90‑1 (MQ=255) agggatccccgccagcagcgccataaagctgcccgttgcgccaatcgcagtggtggtaggggcggcaaaattctccgctttaaaccagaa > 1:455484‑M2/3‑3 (MQ=255) ggATCCCCGCACTCGGCAGCACCGCTGGGATCTTTGTTGCCATCACGGCgatg > 1:117816/1‑53 (MQ=255) ggATCCCCGCACTCGGCAGCACCGCTGGGATCTTTGTTGCCATCACGGCgatg < 2:117816/53‑1 (MQ=255) ggATCCCCGCACTCGGCAGCACCGCTGGGATCTTTGTTGCCATCACGGCGATGATCGTCATTCTTGGTTCGCTTTCCAGCTGCGTGATGt > 1:68521/1‑90 (MQ=255) ggATCCCCGCACTCGGCAGCACCGCTGGGATCTTTGTTGCCATCACGGCGATGATCGTCATTCTTGGTTCGCTTTCCAGCTGCGTGATGt > 1:537778/1‑90 (MQ=255) ggATCCCCGCACTCGGCAGCACCGCTGGGATCTTTGTTGCCATCACGGCGATGATCGTCATTCTTGGTTCGCTTTCCAGCTGCGTGATGt > 2:764512/1‑90 (MQ=255) | CTGCTGGCGCTGGTGATTTCCGGCCTGATGCCCTTCGACAAACTCGCCAATTCTGAAACGCCGATTTCCGACGCCCTGACCTGGATCCCCGCACTCGGCAGCACCGCTGGGATCTTTGTTGCCATCACGGCGATGATCGTCATTCTTGGTTCGCTTTCCAGCTGCGTGATGT > NZ_CP009273/3494001‑3494172 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |