Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2297159	2297197	39	2 [1]	[1] 5	BW25113_RS25870	hypothetical protein

AGCGATTGATTCACCAGAGATATTTCTGCTGGTTTGCTCTCTCATTAGAATTTAACACTAAAAGAGCAGGTAAAATTGTCTGAATGTTCTTTA  >  NZ_CP009273/2297195‑2297287    |                                                                                          aGCGATTGATTCACCAGAGATATTTCTGCTGGTTTGCTCTCTCATTAGAATTTAACACTAAAAGAGCAGGTAAAATTGTCTGAATGTTCt     >  2:287404/1‑90 (MQ=255)    gattgattCACCAGAGATATTTCTGCTGGTTTGctctc                                                      <  1:70040/38‑1 (MQ=255)    gattgattCACCAGAGATATTTCTGCTGGTTTGctctc                                                      >  2:70040/1‑38 (MQ=255)    gattgattCACCAGAGATATTTCTGCTGGTTTGCTCTCTCATTAGAATTTAACACTAAAAGAGCAGGTAAAATTGTCTGAATGTTCTTTa  >  1:75488/1‑90 (MQ=255)    gattgattCACCAGAGATATTTCTGCTGGTTTGCTCTCTCATTAGAATTTAACACTAAAAGAGCAGGTAAAATTGTCTGAATGTTCTTTa  <  2:61455/90‑1 (MQ=255)    |                                                                                          AGCGATTGATTCACCAGAGATATTTCTGCTGGTTTGCTCTCTCATTAGAATTTAACACTAAAAGAGCAGGTAAAATTGTCTGAATGTTCTTTA  >  NZ_CP009273/2297195‑2297287

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑