New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP009273 = 295506499 (0.950)3 (0.030) 3/160 4.7 3.0% coding (724/3369 nt) recC exodeoxyribonuclease V subunit gamma
?NZ_CP009273 = 2955068 97 (0.970)coding (720/3369 nt) recC exodeoxyribonuclease V subunit gamma
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 103 total aligned reads displayed.

TCAAAACTGTGTCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATACCGCATATAAAGAC  >  NZ_CP009273/2954979‑2955157
                                                                                         |                                                                                         
tCAAAACTGTGTCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTa                                                                                           <  2:2206738/90‑1 (MQ=255)
 cAAAACTGTGTCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTaa                                                                                          <  1:2344214/90‑1 (MQ=255)
   aaaCTGTGTCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAAc                                                                                        <  1:907854/90‑1 (MQ=255)
   aaaCTGTGTCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAAc                                                                                        <  1:743773/90‑1 (MQ=255)
   aaaCTGTGTCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAAc                                                                                        <  1:2419011/90‑1 (MQ=255)
   aaaCTGTGTCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAAc                                                                                        <  1:1785860/90‑1 (MQ=255)
      cTGTGTCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGGTGGGAAACAgg                                                                                     >  1:2151217/1‑90 (MQ=255)
        gtgtCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGgag                                                                                   >  2:1913268/1‑90 (MQ=255)
        gtgtCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGgag                                                                                   >  2:2401752/1‑90 (MQ=255)
        gtgtCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGgag                                                                                   >  1:1651132/1‑90 (MQ=255)
        gtgtCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGgag                                                                                   >  2:2157861/1‑90 (MQ=255)
        gtgtCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGgag                                                                                   >  2:1995099/1‑90 (MQ=255)
        gtgtCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGgag                                                                                   >  2:1379126/1‑90 (MQ=255)
        gtgtCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGGAAAAAGgag                                                                                   >  2:2979643/1‑90 (MQ=255)
        gtgtCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGGTGGTAAACAGgag                                                                                   >  1:847992/1‑90 (MQ=255)
        gtgtCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATAACGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGgag                                                                                   >  2:1246673/1‑90 (MQ=255)
        gtgtCGACGCAGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAgggg                                                                                   >  2:116699/1‑88 (MQ=255)
         tgtCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGgaga                                                                                  <  1:2817837/90‑1 (MQ=255)
          gtCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGAt                                                                                 <  1:2401752/90‑1 (MQ=255)
          gtCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGAt                                                                                 <  1:2514460/90‑1 (MQ=255)
          gtCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGAt                                                                                 <  1:1995099/90‑1 (MQ=255)
          gtCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGAt                                                                                 <  1:1913268/90‑1 (MQ=255)
          gtCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGAt                                                                                 <  1:1610501/90‑1 (MQ=255)
          gtCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGAt                                                                                 <  2:1105759/90‑1 (MQ=255)
          gtCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGGAAAAAGGAGAt                                                                                 >  1:2607662/1‑90 (MQ=255)
           tCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATg                                                                                <  2:1541231/90‑1 (MQ=255)
             gACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGa                                                                              >  2:1134736/1‑90 (MQ=255)
             gACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGGTGGTAAAAAGGAGATggg                                                                              >  1:1534131/1‑89 (MQ=255)
              aCGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGAt                                                                             <  1:257056/90‑1 (MQ=255)
               cGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGAtt                                                                            >  1:2897925/1‑90 (MQ=255)
                  tGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGGTGGGAAAAAGGAGATGGAtttta                                                                         >  1:1252688/1‑88 (MQ=255)
                    aCGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAat                                                                       <  1:1134736/90‑1 (MQ=255)
                    aCGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAat                                                                       <  1:1379126/90‑1 (MQ=255)
                    aCGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAat                                                                       <  1:1578315/90‑1 (MQ=255)
                    aCGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAat                                                                       <  2:1736704/90‑1 (MQ=255)
                    aCGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAat                                                                       <  2:2604589/90‑1 (MQ=255)
                    aCGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAat                                                                       <  1:1706449/90‑1 (MQ=255)
                    aCGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAat                                                                       <  2:2152332/90‑1 (MQ=255)
                    aCGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAat                                                                       <  2:1167933/90‑1 (MQ=255)
                    aCGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATAACGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAat                                                                       <  1:1246673/90‑1 (MQ=255)
                           agcagTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTa                                                                >  2:125569/1‑90 (MQ=255)
                               gTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCa                                                            <  1:2135503/90‑1 (MQ=255)
                               gTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCa                                                            <  2:1572893/90‑1 (MQ=255)
                               gTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCa                                                            <  1:2371864/90‑1 (MQ=255)
                                 ttCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGGTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAgc                                                          >  1:992718/1‑90 (MQ=255)
                                              cAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCt                                             <  2:1651132/90‑1 (MQ=255)
                                              cAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCt                                             <  2:2590054/90‑1 (MQ=255)
                                                  aTCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGgag                                         <  2:1588280/90‑1 (MQ=255)
                                                          tatCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAAAATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAg                                 >  1:953521/1‑90 (MQ=255)
                                                            tCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGc                               >  2:2899039/1‑90 (MQ=255)
                                                            tCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGc                               >  2:1555619/1‑90 (MQ=255)
                                                            tCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGc                               >  2:753010/1‑90 (MQ=255)
                                                            tCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGc                               >  2:563040/1‑90 (MQ=255)
                                                             cGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCg                              >  2:616396/1‑90 (MQ=255)
                                                              gCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAat                                                                       >  2:2719548/1‑48 (MQ=255)
                                                              gCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAat                                                                       <  1:2719548/48‑1 (MQ=255)
                                                              gCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAat                                                                       <  1:1601707/48‑1 (MQ=255)
                                                              gCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAat                                                                       >  2:1601707/1‑48 (MQ=255)
                                                              gCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCa                                                            <  2:678882/59‑1 (MQ=255)
                                                              gCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCa                                                            >  1:678882/1‑59 (MQ=255)
                                                              gCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGga                                          <  2:861969/77‑1 (MQ=255)
                                                              gCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGga                                          >  1:861969/1‑77 (MQ=255)
                                                              gCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCgg                             >  2:881113/1‑90 (MQ=255)
                                                              gCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCgg                             >  2:1165302/1‑90 (MQ=255)
                                                              gCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCgg                             >  1:1725200/1‑90 (MQ=255)
                                                              gCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAAAAGGCgg                             >  1:10190/1‑90 (MQ=255)
                                                              gCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAAAAGGCgg                             >  1:223488/1‑90 (MQ=255)
                                                              gCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCCGTAGCGCCTGGAGATAAACAGGCgg                             >  1:2149955/1‑90 (MQ=255)
                                                              gCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAACGCCTGTAGCGCCTGGAGATAAACAAGCgg                             >  1:2955963/1‑90 (MQ=255)
                                                              gCCCCAGTAATAACGGCAGGGGGTGGTAAACAGGAGGTGGCTTTCAAAATGTTTACCCCGCCCCTGTAGCGCCTGGAGATAAACAGGCgg                             >  1:2508013/1‑90 (MQ=255)
                                                              gCCCCAGTAATAACGGCAGGGGGTGGTAAACAGGAGATGGATTTCAAAATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCgg                             >  1:2365458/1‑90 (MQ=255)
                                                                cccAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTa                           <  1:1228055/90‑1 (MQ=255)
                                                                cccAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTa                           <  1:616396/90‑1 (MQ=255)
                                                                cccAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTa                           <  1:753010/90‑1 (MQ=255)
                                                                  cAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAAc                         <  2:1252688/90‑1 (MQ=255)
                                                                  cAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAAc                         <  1:1771313/90‑1 (MQ=255)
                                                                  cAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAAc                         <  2:2332081/90‑1 (MQ=255)
                                                                  cAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAAc                         <  1:1622865/90‑1 (MQ=255)
                                                                    gTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAAcgc                       <  1:2796895/90‑1 (MQ=255)
                                                                    gTAATAACGGCAGGGGTTGGTAAACAGGAGAAGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAAcgc                       <  2:913199/90‑1 (MQ=255)
                                                                         aaCGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGaaa                  <  2:2151217/90‑1 (MQ=255)
                                                                            ggCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATAc               <  2:841597/90‑1 (MQ=255)
                                                                             gCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATAcc              <  2:1725200/90‑1 (MQ=255)
                                                                             gCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGGAACGCGGAAAAAcc              >  1:2084513/1‑90 (MQ=255)
                                                                              cAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATACCg             <  1:2899039/90‑1 (MQ=255)
                                                                              cAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATACCg             <  1:2840779/90‑1 (MQ=255)
                                                                              cAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATACCg             <  2:719920/90‑1 (MQ=255)
                                                                              cAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATACCg             <  2:610504/90‑1 (MQ=255)
                                                                              cAGGGGGTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGGAACGCGGAAAAACCg             >  1:2480162/1‑90 (MQ=255)
                                                                              cAGGGGGTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAAAAGGCGGTAAAGCGGGAAAAccc             >  1:2730528/1‑89 (MQ=255)
                                                                                ggggTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGga                                          <  1:2467357/59‑1 (MQ=255)
                                                                                ggggTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGga                                          >  2:2467357/1‑59 (MQ=255)
                                                                                ggggTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATACCGCa           <  2:844213/90‑1 (MQ=255)
                                                                                     tGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATACCGCATATaa      >  2:1825538/1‑90 (MQ=255)
                                                                                     tGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATACCGCATATaa      >  2:2776257/1‑90 (MQ=255)
                                                                                         aaaCAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATACCGCATATAAAGAc  <  2:550546/90‑1 (MQ=255)
                                                                                         aaaCAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATACCGCATATAAAGAc  <  1:1165302/90‑1 (MQ=255)
                                                                                         aaaCAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATACCGCATATAAAGAc  <  2:1907819/90‑1 (MQ=255)
                                                                                         aaaCAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATACCGCATATAAAGAc  <  2:884799/90‑1 (MQ=255)
                                                                                         aaaCAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATACCGCATATAAAGAc  <  2:1059550/90‑1 (MQ=255)
                                                                                         |                                                                                         
TCAAAACTGTGTCGACGCTGACGGGTCAGCAGTTTCGCCAGATAAGCAGGATCTTTAATATCGCCCCAGTAATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATACCGCATATAAAGAC  >  NZ_CP009273/2954979‑2955157

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.