New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP009273	= 3738194	31 (1.270)	4 (0.160) +TGGG	3/148	1.8	11.3%	coding (31/1278 nt)	yiaN	2,3‑diketo‑L‑gulonate transporter large permease YiaN
	?	NZ_CP009273	3738195 =	32 (1.200)					coding (32/1278 nt)	yiaN	2,3‑diketo‑L‑gulonate transporter large permease YiaN
Rejected: Frequency below/above cutoff threshold.

ATATCAACTCATCACGCGTAGCAATTCTCTAACGTCGCCACCGCAAGGAGCTTAATCATGGCTGTGCTGATTTTTCTGGGCTGTCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NZ_CP009273/3738107‑3738194 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGC  >  NZ_CP009273/3738195‑3738231                                                                                         ||||                                      ATATCAACTCATCACGCGTAGCAATTCTCTAACGTCGCCACCGCAAGGAGCTTAATCATGGCTGTGCTGATTTTTCTGGGCTGTCTGTTG                                         <  1:604227/90‑1          CATCACGCGTAGCAATTCTCTAACGTCGCCACCGCAAGGAGCTTAATCATGGCTGTGCTGATTTTTCTGGGCTGTCTGTTGGGTGGGatt                                >  2:300976/1‑87                                                         CATGGCTGTGCTGATTTTTCTGGGCTGTCTGTTGGGTGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGC  <  1:143439/73‑1                                                         CATGGCTGTGCTGATTTTTCTGGGCTGTCTGTTGGGTGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGC  >  2:143439/1‑73                                                                                         ||||                                      ATATCAACTCATCACGCGTAGCAATTCTCTAACGTCGCCACCGCAAGGAGCTTAATCATGGCTGTGCTGATTTTTCTGGGCTGTCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NZ_CP009273/3738107‑3738194 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGC  >  NZ_CP009273/3738195‑3738231

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.