Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1991553	1991586	34	2 [1]	[1] 2	tcyL	cystine ABC transporter permease

GATTGTCGCGGCCAGCGACGTATCTTTTACCAGGCTAATAAAGCTGTTCGACAGCGGCGGCAACGCCACACGCGCCGCCTGTGGCAAAATCGCGCGACGCAT  >  NZ_CP009273/1991463‑1991564                                                                                          |             gATTGTCGCGGCCAGCGACGTATCTTTTACCAGGCTAATAAAGCTGTTCGACAGCGGCGGCAACGCCACACGCGCCGCCTGTGGCAAAAt              >  1:90528/1‑90 (MQ=255)             cAGCGACGTATCTTTTACCAGGCTAATAAAGCTGTTCGACAGCGGCGGCAACGCCACACGCGCCGCCTGTGGCAAAATCGCGCGACGCAt  <  1:129571/90‑1 (MQ=255)                                                                                          |             GATTGTCGCGGCCAGCGACGTATCTTTTACCAGGCTAATAAAGCTGTTCGACAGCGGCGGCAACGCCACACGCGCCGCCTGTGGCAAAATCGCGCGACGCAT  >  NZ_CP009273/1991463‑1991564

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑