Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1991553	1991586	34	2 [1]	[1] 2	tcyL	cystine ABC transporter permease

GTCTGCCACGGCGTCATACCAATACTGGCTGCCGCTTCCCACTGACCTTTATCAATAGAAGAAATGGCGGCGCGCAGCGTTTCGGCAGCATAGGCGGCAGTGTTCAACGAC  >  NZ_CP009273/1991566‑1991676                      |                                                                                          gTCTGCCACGGCGTCATACCAATACTGGCTGCCGCTTCCCACTGACCTTTATCAATAGAAGAAATGGCGGCGCGCAGCGTTTCGgcagca                       <  2:90528/90‑1 (MQ=255)                      aTACTGGCTGCCGCTTCCCACTGACCTTTATCAATAGAAGAAATGGCGGCGCGCAGCGTTTCGGCAGCATAGGCGGCAGTGTTCAACGAc  >  2:219235/1‑90 (MQ=255)                      |                                                                                          GTCTGCCACGGCGTCATACCAATACTGGCTGCCGCTTCCCACTGACCTTTATCAATAGAAGAAATGGCGGCGCGCAGCGTTTCGGCAGCATAGGCGGCAGTGTTCAACGAC  >  NZ_CP009273/1991566‑1991676

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑